RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 CHERPQ8IWX8 916 aaKnown RBP3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 ADGRF2Q8IZF7 708 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 SLC34A3Q8N130 599 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 NME8Q8N427 588 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 ZNF114Q8NC26 417 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 ITFG1Q8TB96 612 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 WFIKKN2Q8TEU8 576 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 CHURC1Q8WUH1 139 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 DNASE2BQ8WZ79 361 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 RRNAD1Q96FB5 475 aaKnown RBP3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 SCMH1Q96GD3 660 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 RSRC1Q96IZ7 334 aaKnown RBP3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 HARBI1Q96MB7 349 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 FIZ1Q96SL8 496 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 PCGF1Q9BSM1 259 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 ZFP14Q9HCL3 533 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 NOX4Q9NPH5 578 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 OCIAD1Q9NX40 245 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 MDFICQ9P1T7 246 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 TBC1D29Q9UFV1 150 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 VPS28Q9UK41 221 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 PILRBQ9UKJ0 227 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 TTC7AQ9ULT0 858 aaPredicted RBP3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 NFS1Q9Y697 457 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 DOCK7Q96N67 2140 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 F5P12259 2224 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 UBE4BO95155 1302 aa3.46□□□□□ -1.85
TOPBP1-208ENST00000511439 EML5Q05BV3 1969 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 IGLV5-37A0A075B6J1 123 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 C1orf226A1L170 272 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 MYBPHLA2RUH7 354 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 SPECC1L-ADORA2AF8WAN1 911 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 K7ENM7 598 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 FLRT2O43155 660 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 RPS6KA5O75582 802 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 IGKV3-20P01619 116 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 UQCRFS1P1P0C7P4 283 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 SRCP12931 536 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 MCM3P25205 808 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 PTGER3P43115 390 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 PDLIM4P50479 330 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 GALCP54803 685 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 CDH8P55286 799 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 HNRNPH2P55795 449 aaKnown RBP3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 DSCR9P59020 149 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 SEC61BP60468 96 aaKnown RBP3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 TIMM10P62072 90 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 RPS6P62753 249 aaKnown RBP3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 TUBA1BP68363 451 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 ZBED6P86452 979 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 MC1RQ01726 317 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 GRSF1Q12849 480 aaKnown RBP eCLIP3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 GRIK2Q13002 908 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 AIMP2Q13155 320 aaKnown RBP3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 MYBPHQ13203 477 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 PON2Q15165 354 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 OASLQ15646 514 aaKnown RBP3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 NAB2Q15742 525 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 STXBP2Q15833 593 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 CTF1Q16619 201 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 TMEM266Q2M3C6 531 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 ATP13A5Q4VNC0 1218 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 SPDYCQ5MJ68 293 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 CELF3Q5SZQ8 465 aaKnown RBP3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 LIN9Q5TKA1 542 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 GFI1BQ5VTD9 330 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 RHBDF2Q6PJF5 856 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 SLC36A4Q6YBV0 504 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 CHST9Q7L1S5 443 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 CUZD1Q86UP6 607 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 RNF168Q8IYW5 571 aaPredicted RBP3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 GMCL1P1Q8NEA9 526 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 TSTD1Q8NFU3 115 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 ZNF564Q8TBZ8 553 aaPredicted RBP3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 MAGEC3Q8TD91 643 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 ING5Q8WYH8 240 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 FAM120BQ96EK7 910 aaKnown RBP3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 DYNLL2Q96FJ2 89 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 PGAM5Q96HS1 289 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 ZNF578Q96N58 590 aaPredicted RBP3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 OR2A14Q96R47 310 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 NCAPGQ9BPX3 1015 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 CRNKL1Q9BZJ0 848 aaKnown RBP3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 FAM49AQ9H0Q0 323 aaPredicted RBP3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 CCDC68Q9H2F9 335 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 SMARCAD1Q9H4L7 1026 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 ACSS1Q9NUB1 689 aaPredicted RBP3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 NSMCE4AQ9NXX6 385 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 DONSONQ9NYP3 566 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 C1RLQ9NZP8 487 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 NYAP2Q9P242 653 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 ANAPC2Q9UJX6 822 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 SNX9Q9Y5X1 595 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 SESN1Q9Y6P5 492 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 CSMD2Q7Z408 3487 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 MYH8P13535 1937 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 ADAMTS9Q9P2N4 1935 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 MED13LQ71F56 2210 aa3.46□□□□□ -1.86
TOPBP1-208ENST00000511439 PCDH15Q96QU1 1955 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 AKAP9Q99996 3911 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms