RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 INPP5KQ9BT40 448 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 OR2B2Q9GZK3 357 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 FAM49AQ9H0Q0 323 aaPredicted RBP3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 TLE6Q9H808 572 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 Q9H8V8 135 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 CHST11Q9NPF2 352 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 C19orf25Q9UFG5 118 aaPredicted RBP3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 CHKBQ9Y259 395 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 R4GN57 208 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 WDR81Q562E7 1941 aa3.09□□□□□ -1.92
TRAPPC11-207ENST00000511409 A0A087WV48 116 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 TRAV24A0A0B4J272 114 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 CASTOR2A6NHX0 329 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 ERVV-2B6SEH9 535 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 PRR23D1E9PI22 279 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 EPHB6O15197 1021 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 CLPTM1O96005 669 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 CD48P09326 243 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 PRSS56P0CW18 603 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 PRR23D2P0DMB1 279 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 ERVK-10P10266 1014 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 ADRA2CP18825 462 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 EPORP19235 508 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 TIMP3P35625 211 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 TNNT3P45378 269 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 NAGLUP54802 743 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 TUBB4BP68371 445 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 TRAP1Q12931 704 aaKnown RBP3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 TNK1Q13470 666 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 P2RY6Q15077 328 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 PTGISQ16647 500 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 LBHQ53QV2 105 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 SLC25A53Q5H9E4 307 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 FFAR4Q5NUL3 377 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 ZNF449Q6P9G9 518 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 CTR9Q6PD62 1173 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 TMEM182Q6ZP80 229 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 C15orf39Q6ZRI6 1047 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 USP43Q70EL4 1123 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 PIGZQ86VD9 579 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 NKAIN3Q8N8D7 197 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 NIPA2Q8N8Q9 360 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 CCDC63Q8NA47 563 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 TMEM178AQ8NBL3 297 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 OR4C3Q8NH37 302 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 C9orf43Q8TAL5 461 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 TSACCQ96A04 125 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 CENPTQ96BT3 561 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 PYCR2Q96C36 320 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 FSD1Q9BTV5 496 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 CPVLQ9H3G5 476 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 PKD2L2Q9NZM6 624 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 ARMCX3Q9UH62 379 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 NOL7Q9UMY1 257 aaKnown RBP3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 KCNK7Q9Y2U2 307 aa3.08□□□□□ -1.92
TRAPPC11-207ENST00000511409 KIAA1210Q9ULL0 1709 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 NOTCH4Q99466 2003 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 PPIP5K2O43314 1243 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 GRID2O43424 1007 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 EXTL3O43909 919 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 CDC123O75794 336 aaPredicted RBP3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 DFFBO76075 338 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 IGKV3-20P01619 116 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 SERPING1P05155 500 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 SP1P08047 785 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 ZFYP08048 801 aaPredicted RBP3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 LBPP18428 481 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 ANOS1P23352 680 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 ALDH4A1P30038 563 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 ALDH1B1P30837 517 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 CTNNA1P35221 906 aaKnown RBP3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 SOAT1P35610 550 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 CDKN1AP38936 164 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 CETN2P41208 172 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 MAGEA11P43364 429 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 NKX2-1P43699 371 aaPredicted RBP3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 MFAP3P55082 362 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 PTENP60484 403 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 SP3Q02447 781 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 TUBB2AQ13885 445 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 RBBP7Q16576 425 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 FAM174BQ3ZCQ3 159 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 ZNF876PQ49A33 203 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 NHSL2Q5HYW2 709 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 C9orf50Q5SZB4 431 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 MSANTD1Q6ZTZ1 278 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 PHLDB2Q86SQ0 1253 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 GLRX5Q86SX6 157 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 CROCCP3Q8IVE0 287 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 KLHDC1Q8N7A1 406 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 GPRC5AQ8NFJ5 357 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 HPSE2Q8WWQ2 592 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 RAD54LQ92698 747 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 PGLYRP2Q96PD5 576 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 F2RL3Q96RI0 385 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 TUBB2BQ9BVA1 445 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 MTMR12Q9C0I1 747 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 SHARPINQ9H0F6 387 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 MINDY3Q9H8M7 445 aa3.07□□□□□ -1.92
TRAPPC11-207ENST00000511409 RNF121Q9H920 327 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms