RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 CAV1Q03135 178 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 ERV3-1Q14264 604 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 UGT3A1Q6NUS8 523 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 FAM198BQ6UWH4 519 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 SBSNQ6UWP8 590 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 PAQR7Q86WK9 346 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 CTAGE3PQ8IX95 158 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 SYTL1Q8IYJ3 562 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 MYO1HQ8N1T3 1032 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 METTL27Q8N6F8 245 aaPredicted RBP13.01□□□□□ -0.33
SNF8-206ENST00000509989 PPM1NQ8N819 430 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 SMPDL3AQ92484 453 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 ALKBH8Q96BT7 664 aaKnown RBP13.01□□□□□ -0.33
SNF8-206ENST00000509989 PYCR2Q96C36 320 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 CLIP3Q96DZ5 547 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 SLC45A3Q96JT2 553 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 RBBP8Q99708 897 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 RAB11FIP5Q9BXF6 653 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 CHRNA10Q9GZZ6 450 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 SLC22A11Q9NSA0 550 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 PLCL2Q9UPR0 1127 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 PCDHB3Q9Y5E6 796 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 HMX2A2RU54 273 aa13□□□□□ -0.33
SNF8-206ENST00000509989 OR2A25A4D2G3 310 aa13□□□□□ -0.33
SNF8-206ENST00000509989 E7EQ34 232 aa13□□□□□ -0.33
SNF8-206ENST00000509989 EIF3FO00303 357 aaPredicted RBP13□□□□□ -0.33
SNF8-206ENST00000509989 P2RX6O15547 441 aa13□□□□□ -0.33
SNF8-206ENST00000509989 KDM1AO60341 852 aa13□□□□□ -0.33
SNF8-206ENST00000509989 GUCA1CO95843 209 aa13□□□□□ -0.33
SNF8-206ENST00000509989 RPA3P35244 121 aaPredicted RBP13□□□□□ -0.33
SNF8-206ENST00000509989 VSX2P58304 361 aaPredicted RBP13□□□□□ -0.33
SNF8-206ENST00000509989 IL2P60568 153 aa13□□□□□ -0.33
SNF8-206ENST00000509989 TBPL1P62380 186 aa13□□□□□ -0.33
SNF8-206ENST00000509989 CDC20Q12834 499 aa13□□□□□ -0.33
SNF8-206ENST00000509989 DLG1Q12959 904 aa13□□□□□ -0.33
SNF8-206ENST00000509989 IL10RAQ13651 578 aa13□□□□□ -0.33
SNF8-206ENST00000509989 BMPR2Q13873 1038 aa13□□□□□ -0.33
SNF8-206ENST00000509989 PPP1R3AQ16821 1122 aa13□□□□□ -0.33
SNF8-206ENST00000509989 ICE2Q659A1 982 aa13□□□□□ -0.33
SNF8-206ENST00000509989 ZNF425Q6IV72 752 aa13□□□□□ -0.33
SNF8-206ENST00000509989 AGTRAPQ6RW13 159 aa13□□□□□ -0.33
SNF8-206ENST00000509989 CMC1Q7Z7K0 106 aa13□□□□□ -0.33
SNF8-206ENST00000509989 BPHLQ86WA6 291 aaPredicted RBP13□□□□□ -0.33
SNF8-206ENST00000509989 GSPT2Q8IYD1 628 aaKnown RBP13□□□□□ -0.33
SNF8-206ENST00000509989 UHMK1Q8TAS1 419 aaKnown RBP13□□□□□ -0.33
SNF8-206ENST00000509989 MAGEC3Q8TD91 643 aa13□□□□□ -0.33
SNF8-206ENST00000509989 SLC22A18Q96BI1 424 aa13□□□□□ -0.33
SNF8-206ENST00000509989 GBP5Q96PP8 586 aa13□□□□□ -0.33
SNF8-206ENST00000509989 OR4K3Q96R72 315 aa13□□□□□ -0.33
SNF8-206ENST00000509989 CDC42EP4Q9H3Q1 356 aaKnown RBP13□□□□□ -0.33
SNF8-206ENST00000509989 ACTL8Q9H568 366 aa13□□□□□ -0.33
SNF8-206ENST00000509989 FANCEQ9HB96 536 aa13□□□□□ -0.33
SNF8-206ENST00000509989 MRPS30Q9NP92 439 aaKnown RBP13□□□□□ -0.33
SNF8-206ENST00000509989 FAM114A2Q9NRY5 505 aa13□□□□□ -0.33
SNF8-206ENST00000509989 SERTAD3Q9UJW9 196 aa13□□□□□ -0.33
SNF8-206ENST00000509989 CFAP46Q8IYW2 2715 aa13□□□□□ -0.33
SNF8-206ENST00000509989 NUP210LQ5VU65 1888 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 H7BY64 318 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 KIF2AO00139 706 aaPredicted RBP12.99□□□□□ -0.33
SNF8-206ENST00000509989 MASP2O00187 686 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 NDC80O14777 642 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 HAT1O14929 419 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 KALRNO60229 2985 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 C8GP07360 202 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 FAM153BP0C7A2 387 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 RHOXF2BP0C7M4 288 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 FAM87AP0C7U9 286 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 CCNYL3P0C7X3 344 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 KCNC1P48547 511 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 RGS4P49798 205 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 NAE1Q13564 534 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 ARHGAP19Q14CB8 494 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 TSNQ15631 228 aaKnown RBP12.99□□□□□ -0.33
SNF8-206ENST00000509989 DEFB109BQ30KR1 87 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 FAM153CQ494X1 144 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 FBXO48Q5FWF7 155 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 RNF44Q7L0R7 432 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 AMER2Q8N7J2 671 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 ENDOVQ8N8Q3 282 aaKnown RBP12.99□□□□□ -0.33
SNF8-206ENST00000509989 OR8K5Q8NH50 307 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 ZNF285Q96NJ3 590 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 PRAP1Q96NZ9 151 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 GPR22Q99680 433 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 MACROD1Q9BQ69 325 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 RHOXF2Q9BQY4 288 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 PLCD4Q9BRC7 762 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 MESP1Q9BRJ9 268 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 PHACTR1Q9C0D0 580 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 SPNS1Q9H2V7 528 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 PARVBQ9HBI1 364 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 INTS7Q9NVH2 962 aaKnown RBP12.99□□□□□ -0.33
SNF8-206ENST00000509989 CORO1CQ9ULV4 474 aaPredicted RBP12.99□□□□□ -0.33
SNF8-206ENST00000509989 MRPS2Q9Y399 296 aaKnown RBP12.99□□□□□ -0.33
SNF8-206ENST00000509989 KLK4Q9Y5K2 254 aa12.99□□□□□ -0.33
SNF8-206ENST00000509989 CDC14CA4D256 554 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 ZNF891A8MT65 544 aaPredicted RBP12.98□□□□□ -0.33
SNF8-206ENST00000509989 H0YGG7 62 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 FFAR3O14843 346 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 ATXN7O15265 892 aaPredicted RBP12.98□□□□□ -0.33
SNF8-206ENST00000509989 GPR42O15529 346 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms