RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 EIF2S3P41091 472 aaKnown RBP4.4□□□□□ -1.71
NIPBL-206ENST00000509429 PRKCIP41743 596 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 ALDH3B2P48448 385 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 NPY2RP49146 381 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 HOXA1P49639 335 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-206ENST00000509429 TOB1P50616 345 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-206ENST00000509429 HNRNPMP52272 730 aaKnown RBP eCLIP4.4□□□□□ -1.71
NIPBL-206ENST00000509429 STAT2P52630 851 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 PNLIPRP1P54315 467 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 FOXG1P55316 489 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-206ENST00000509429 LRRC63Q05C16 580 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 PPP3CAQ08209 521 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 SPOCK1Q08629 439 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 MGAT5Q09328 741 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 TROAPQ12815 778 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 TSPAN31Q12999 210 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 SNTB2Q13425 540 aaKnown RBP4.4□□□□□ -1.71
NIPBL-206ENST00000509429 PEX6Q13608 980 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 IRF3Q14653 427 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 PDK2Q15119 407 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 GCNT6Q5T4J0 391 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 BEND3Q5T5X7 828 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 TMEM200BQ69YZ2 307 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 PYHIN1Q6K0P9 492 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 TTI2Q6NXR4 508 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 PMF1Q6P1K2 205 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 PSRC1Q6PGN9 363 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-206ENST00000509429 TSSK4Q6SA08 328 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 KIAA0408Q6ZU52 694 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 STOX1Q6ZVD7 989 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 GPRIN3Q6ZVF9 776 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 LRRC8DQ7L1W4 858 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 NDUFAF7Q7L592 441 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 LRRC70Q7Z2Q7 622 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 PAGE2Q7Z2X7 111 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 GPR141Q7Z602 305 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 CUZD1Q86UP6 607 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 LHFPL3Q86UP9 236 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 NUDCD3Q8IVD9 361 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 FOXRED2Q8IWF2 684 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 PPIL6Q8IXY8 311 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 PDIK1LQ8N165 341 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 TRAM1L1Q8N609 369 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 PCDH20Q8N6Y1 951 aaKnown RBP4.4□□□□□ -1.71
NIPBL-206ENST00000509429 ATP6V0D2Q8N8Y2 350 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 PSD4Q8NDX1 1056 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 AGBL3Q8NEM8 1001 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 OR2L3Q8NG85 312 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 ELP5Q8TE02 316 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 DUSP19Q8WTR2 217 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 ZNF473Q8WTR7 871 aaKnown RBP4.4□□□□□ -1.71
NIPBL-206ENST00000509429 SLC22A17Q8WUG5 538 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 CKAP2Q8WWK9 683 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 SSH1Q8WYL5 1049 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 AKAP1Q92667 903 aaKnown RBP eCLIP4.4□□□□□ -1.71
NIPBL-206ENST00000509429 TMEM186Q96B77 213 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 PHF21AQ96BD5 680 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 BOD1Q96IK1 185 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 MRGPRX3Q96LB0 322 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 MAGEB10Q96LZ2 347 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-206ENST00000509429 HAPLN3Q96S86 360 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 PKP2Q99959 881 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 REEP2Q9BRK0 252 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 MXRA8Q9BRK3 442 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 TUBB6Q9BUF5 446 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 DUSP26Q9BV47 211 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 GON7Q9BXV9 100 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 TRIM31Q9BZY9 425 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 SAV1Q9H4B6 383 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-206ENST00000509429 POLR1BQ9H9Y6 1135 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 IL21RQ9HBE5 538 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 ARHGEF3Q9NR81 526 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 SEMA4GQ9NTN9 838 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 STMN3Q9NZ72 180 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 GDE1Q9NZC3 331 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 H2AFY2Q9P0M6 372 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-206ENST00000509429 CPNE7Q9UBL6 633 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 CTNNAL1Q9UBT7 734 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 TUBE1Q9UJT0 475 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 LEF1Q9UJU2 399 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-206ENST00000509429 RAB23Q9ULC3 237 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 VPS4AQ9UN37 437 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 ADAMTS5Q9UNA0 930 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 MRPS7Q9Y2R9 242 aaKnown RBP4.4□□□□□ -1.71
NIPBL-206ENST00000509429 ACOT9Q9Y305 439 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 V9GYQ6 96 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 ZNF518AQ6AHZ1 1483 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 UBN2Q6ZU65 1347 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 NRCAMQ92823 1304 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 STK36Q9NRP7 1315 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 MED14O60244 1454 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 A0A087WZY1 265 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 DPPA5A6NC42 116 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 TMEM200CA6NKL6 621 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 LRRC53A6NM62 1247 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 KCNJ18B7U540 433 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 E5RI56 91 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 NPIPA2E9PIF3 369 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 PODXLO00592 558 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 FBP2O00757 339 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms