RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 GPATCH11Q8N954 259 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 C19orf47Q8N9M1 422 aaKnown RBP6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 OR2A1Q8NGT9 310 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 OR2L8Q8NGY9 312 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 HMGCLL1Q8TB92 370 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 ZNF480Q8WV37 535 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 EEF1AKMT1Q8WVE0 214 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 ASZ1Q8WWH4 475 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 ASB11Q8WXH4 323 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 FGF11Q92914 225 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 LINGO1Q96FE5 620 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 VPS39Q96JC1 886 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 ELMO2Q96JJ3 720 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 PANX3Q96QZ0 392 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 OR6C1Q96RD1 312 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 CD180Q99467 661 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 DPYSL5Q9BPU6 564 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 FUT8Q9BYC5 575 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 SPNS1Q9H2V7 528 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 SRMSQ9H3Y6 488 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 PRORYQ9H606 182 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 THSD1Q9NS62 852 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 IL17BQ9UHF5 180 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 PILRAQ9UKJ1 303 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 MTO1Q9Y2Z2 717 aaKnown RBP6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 TMEM184BQ9Y519 407 aaPredicted RBP6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 ASB1Q9Y576 335 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 HEBP2Q9Y5Z4 205 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 MRPS18BQ9Y676 258 aaKnown RBP6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 A0A0J9YY10 115 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 NPEPPSL1A6NEC2 478 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 CDC7O00311 574 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 TOX3O15405 576 aaPredicted RBP6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 P2RX6O15547 441 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 RAD1O60671 282 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 PRAMEF4O60810 478 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 RASSF9O75901 435 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 STK17BO94768 372 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 SLC16A8O95907 504 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 CTAGE8P0CG41 777 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 LIPCP11150 499 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 FGF5P12034 268 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 LIFP15018 202 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 EPB42P16452 691 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 CHRM3P20309 590 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 CD9P21926 228 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 GSTT1P30711 240 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 CSTF2P33240 577 aaKnown RBP eCLIP6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 RORAP35398 523 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 SKIV2L2P42285 1042 aaKnown RBP6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 EFNA3P52797 238 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 TBPL1P62380 186 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 IRF9Q00978 393 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 CALCOCO2Q13137 446 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 GPS2Q13227 327 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 TUBB3Q13509 450 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 PRAMEF9Q5VWM5 478 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 FAM198BQ6UWH4 519 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 SUSD1Q6UWL2 747 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 NEK10Q6ZWH5 1172 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 COX15Q7KZN9 410 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 RNF44Q7L0R7 432 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 MAATS1Q7Z4T9 603 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 SDCCAG8Q86SQ7 713 aaPredicted RBP6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 SLC26A11Q86WA9 606 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 CCDC25Q86WR0 208 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 RELL1Q8IUW5 271 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 CTAGE4Q8IX94 777 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 SPATA6LQ8N4H0 392 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 DNAJC22Q8N4W6 341 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 FBXO15Q8NCQ5 510 aaPredicted RBP6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 CALML6Q8TD86 181 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 HNRNPLLQ8WVV9 542 aaKnown RBP6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 ZFPM2Q8WW38 1151 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 KCNE4Q8WWG9 221 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 NKD1Q969G9 470 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 PTERQ96BW5 349 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 ZNF285Q96NJ3 590 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 OR4K3Q96R72 315 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 TAAR9Q96RI9 348 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 GPR22Q99680 433 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 RBBP8Q99708 897 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 CMKLR1Q99788 373 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 MESP1Q9BRJ9 268 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 NAT9Q9BTE0 207 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 RAB17Q9H0T7 212 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 RHOJQ9H4E5 214 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 PIF1Q9H611 641 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 ANKZF1Q9H8Y5 726 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 FBXO8Q9NRD0 319 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 SLC22A11Q9NSA0 550 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 SLC39A1Q9NY26 324 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 SPATA7Q9P0W8 599 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 STOX2Q9P2F5 926 aaPredicted RBP6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 KLHL42Q9P2K6 505 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 PDE10AQ9Y233 779 aa6.93□□□□□ -1.3
TOPBP1-207ENST00000509162 TLDC2A0PJX2 215 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 PIPSLA2A3N6 862 aa6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.92□□□□□ -1.3
TOPBP1-207ENST00000509162 C2orf74A8MZ97 194 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms