RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 DCAKDQ8WVC6 231 aa8.8□□□□□ -1
NUP54-207ENST00000508583 KCNE4Q8WWG9 221 aa8.8□□□□□ -1
NUP54-207ENST00000508583 DHRS4Q9BTZ2 278 aa8.8□□□□□ -1
NUP54-207ENST00000508583 EFHD1Q9BUP0 239 aa8.8□□□□□ -1
NUP54-207ENST00000508583 CAPS2Q9BXY5 557 aa8.8□□□□□ -1
NUP54-207ENST00000508583 PARD6BQ9BYG5 372 aa8.8□□□□□ -1
NUP54-207ENST00000508583 ULBP3Q9BZM4 244 aa8.8□□□□□ -1
NUP54-207ENST00000508583 SLC7A5P2Q9GIP4 190 aa8.8□□□□□ -1
NUP54-207ENST00000508583 VPS11Q9H270 941 aa8.8□□□□□ -1
NUP54-207ENST00000508583 IRAK4Q9NWZ3 460 aa8.8□□□□□ -1
NUP54-207ENST00000508583 NUDT4Q9NZJ9 180 aa8.8□□□□□ -1
NUP54-207ENST00000508583 CD274Q9NZQ7 290 aa8.8□□□□□ -1
NUP54-207ENST00000508583 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.8□□□□□ -1
NUP54-207ENST00000508583 TAC3Q9UHF0 121 aa8.8□□□□□ -1
NUP54-207ENST00000508583 RAB21Q9UL25 225 aa8.8□□□□□ -1
NUP54-207ENST00000508583 SRPK3Q9UPE1 567 aa8.8□□□□□ -1
NUP54-207ENST00000508583 PLCL2Q9UPR0 1127 aa8.8□□□□□ -1
NUP54-207ENST00000508583 V9GYY5 206 aaPredicted RBP8.8□□□□□ -1
NUP54-207ENST00000508583 ACACBO00763 2458 aa8.8□□□□□ -1
NUP54-207ENST00000508583 CHD8Q9HCK8 2581 aa8.8□□□□□ -1
NUP54-207ENST00000508583 FREM2Q5SZK8 3169 aa8.79□□□□□ -1
NUP54-207ENST00000508583 APC2O95996 2303 aa8.79□□□□□ -1
NUP54-207ENST00000508583 A0A1W2PNU3 283 aaPredicted RBP8.79□□□□□ -1
NUP54-207ENST00000508583 PMS2P1A4D2B8 440 aa8.79□□□□□ -1
NUP54-207ENST00000508583 TMEM150CB9EJG8 249 aa8.79□□□□□ -1
NUP54-207ENST00000508583 C9orf172C9J069 976 aa8.79□□□□□ -1
NUP54-207ENST00000508583 TRIM49D1C9J1S8 452 aa8.79□□□□□ -1
NUP54-207ENST00000508583 E7EQ34 232 aa8.79□□□□□ -1
NUP54-207ENST00000508583 CDC7O00311 574 aa8.79□□□□□ -1
NUP54-207ENST00000508583 TXNDC9O14530 226 aa8.79□□□□□ -1
NUP54-207ENST00000508583 SRPX2O60687 465 aaPredicted RBP8.79□□□□□ -1
NUP54-207ENST00000508583 CPNE3O75131 537 aaKnown RBP8.79□□□□□ -1
NUP54-207ENST00000508583 ALDOAP04075 364 aaKnown RBP8.79□□□□□ -1
NUP54-207ENST00000508583 NUDT17P0C025 328 aa8.79□□□□□ -1
NUP54-207ENST00000508583 CCNYL3P0C7X3 344 aa8.79□□□□□ -1
NUP54-207ENST00000508583 FOLR1P15328 257 aa8.79□□□□□ -1
NUP54-207ENST00000508583 TFEBP19484 476 aa8.79□□□□□ -1
NUP54-207ENST00000508583 HSD17B3P37058 310 aa8.79□□□□□ -1
NUP54-207ENST00000508583 ETV5P41161 510 aa8.79□□□□□ -1
NUP54-207ENST00000508583 GRIA3P42263 894 aa8.79□□□□□ -1
NUP54-207ENST00000508583 MAGEA12P43365 314 aa8.79□□□□□ -1
NUP54-207ENST00000508583 UCNP55089 124 aa8.79□□□□□ -1
NUP54-207ENST00000508583 SH3BP2P78314 561 aa8.79□□□□□ -1
NUP54-207ENST00000508583 NAE1Q13564 534 aa8.79□□□□□ -1
NUP54-207ENST00000508583 FASTKQ14296 549 aaKnown RBP8.79□□□□□ -1
NUP54-207ENST00000508583 KCNAB1Q14722 419 aa8.79□□□□□ -1
NUP54-207ENST00000508583 YOD1Q5VVQ6 348 aaPredicted RBP8.79□□□□□ -1
NUP54-207ENST00000508583 FIGLAQ6QHK4 219 aa8.79□□□□□ -1
NUP54-207ENST00000508583 SUSD1Q6UWL2 747 aa8.79□□□□□ -1
NUP54-207ENST00000508583 TIFABQ6ZNK6 161 aa8.79□□□□□ -1
NUP54-207ENST00000508583 ADCK2Q7Z695 626 aa8.79□□□□□ -1
NUP54-207ENST00000508583 CROCCP2Q86T23 111 aa8.79□□□□□ -1
NUP54-207ENST00000508583 TRIM73Q86UV7 250 aa8.79□□□□□ -1
NUP54-207ENST00000508583 TDRPQ86YL5 185 aa8.79□□□□□ -1
NUP54-207ENST00000508583 TMEM126BQ8IUX1 230 aa8.79□□□□□ -1
NUP54-207ENST00000508583 MREGQ8N565 214 aa8.79□□□□□ -1
NUP54-207ENST00000508583 ZNF655Q8N720 491 aaPredicted RBP8.79□□□□□ -1
NUP54-207ENST00000508583 PDPRQ8NCN5 879 aa8.79□□□□□ -1
NUP54-207ENST00000508583 OR56A3Q8NH54 315 aa8.79□□□□□ -1
NUP54-207ENST00000508583 FLVCR1-AS1Q8TAF5 88 aa8.79□□□□□ -1
NUP54-207ENST00000508583 ANKRD49Q8WVL7 239 aa8.79□□□□□ -1
NUP54-207ENST00000508583 DLG3Q92796 817 aa8.79□□□□□ -1
NUP54-207ENST00000508583 RERGQ96A58 199 aaPredicted RBP8.79□□□□□ -1
NUP54-207ENST00000508583 KIAA1143Q96AT1 154 aaPredicted RBP8.79□□□□□ -1
NUP54-207ENST00000508583 THAP11Q96EK4 314 aa8.79□□□□□ -1
NUP54-207ENST00000508583 CNTNAP3BQ96NU0 1288 aa8.79□□□□□ -1
NUP54-207ENST00000508583 ZFYVE21Q9BQ24 234 aa8.79□□□□□ -1
NUP54-207ENST00000508583 C17orf62Q9BQA9 187 aa8.79□□□□□ -1
NUP54-207ENST00000508583 DPH2Q9BQC3 489 aaPredicted RBP8.79□□□□□ -1
NUP54-207ENST00000508583 SELENOSQ9BQE4 189 aa8.79□□□□□ -1
NUP54-207ENST00000508583 PLCD4Q9BRC7 762 aa8.79□□□□□ -1
NUP54-207ENST00000508583 DPH7Q9BTV6 452 aa8.79□□□□□ -1
NUP54-207ENST00000508583 ACAT2Q9BWD1 397 aa8.79□□□□□ -1
NUP54-207ENST00000508583 SGPP1Q9BX95 441 aa8.79□□□□□ -1
NUP54-207ENST00000508583 NLNQ9BYT8 704 aa8.79□□□□□ -1
NUP54-207ENST00000508583 CNTNAP3Q9BZ76 1288 aa8.79□□□□□ -1
NUP54-207ENST00000508583 FAM117AQ9C073 453 aa8.79□□□□□ -1
NUP54-207ENST00000508583 TMEM184CQ9NVA4 438 aa8.79□□□□□ -1
NUP54-207ENST00000508583 WWOXQ9NZC7 414 aa8.79□□□□□ -1
NUP54-207ENST00000508583 DYRK1BQ9Y463 629 aa8.79□□□□□ -1
NUP54-207ENST00000508583 PCDHB3Q9Y5E6 796 aa8.79□□□□□ -1
NUP54-207ENST00000508583 B3GALT1Q9Y5Z6 326 aa8.79□□□□□ -1
NUP54-207ENST00000508583 KCNE2Q9Y6J6 123 aa8.79□□□□□ -1
NUP54-207ENST00000508583 AHCTF1Q8WYP5 2266 aa8.79□□□□□ -1
NUP54-207ENST00000508583 URB1O60287 2271 aaKnown RBP8.78□□□□□ -1
NUP54-207ENST00000508583 A0A1W2PPV9 198 aa8.78□□□□□ -1
NUP54-207ENST00000508583 HMX2A2RU54 273 aa8.78□□□□□ -1
NUP54-207ENST00000508583 SUPT3HB4E1H0 165 aa8.78□□□□□ -1
NUP54-207ENST00000508583 ZSCAN9O15535 394 aaPredicted RBP8.78□□□□□ -1
NUP54-207ENST00000508583 SUPT3HO75486 399 aa8.78□□□□□ -1
NUP54-207ENST00000508583 SCRG1O75711 98 aa8.78□□□□□ -1
NUP54-207ENST00000508583 OR2B3O76000 313 aa8.78□□□□□ -1
NUP54-207ENST00000508583 STK17BO94768 372 aa8.78□□□□□ -1
NUP54-207ENST00000508583 KLK3P07288 261 aaPredicted RBP8.78□□□□□ -1
NUP54-207ENST00000508583 GSTA1P08263 222 aa8.78□□□□□ -1
NUP54-207ENST00000508583 PVRP15151 417 aa8.78□□□□□ -1
NUP54-207ENST00000508583 KRT15P19012 456 aa8.78□□□□□ -1
NUP54-207ENST00000508583 CXCR2P25025 360 aa8.78□□□□□ -1
NUP54-207ENST00000508583 PIK3CGP48736 1102 aa8.78□□□□□ -1
NUP54-207ENST00000508583 ARSFP54793 590 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms