RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 MAGED4Q96JG8 741 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 PPP1R2P1Q96PQ5 205 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 PRSS21Q9Y6M0 314 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 FAM169AQ9Y6X4 670 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 PSTPIP1O43586 416 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 CTSVO60911 334 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 WISP2O76076 250 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 MLYCDO95822 493 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 RPN2P04844 631 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 UQCRHP07919 91 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 ITGAMP11215 1152 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 TNNT1P13805 278 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 COMTP21964 271 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 FBLP22087 321 aaKnown RBP8.93□□□□□ -0.98
NEDD9-211ENST00000508546 PSMA3P25788 255 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 PSMB4P28070 264 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 EMP3P54852 163 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 VSX2P58304 361 aaPredicted RBP8.93□□□□□ -0.98
NEDD9-211ENST00000508546 CSNK1G2P78368 415 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 PMP22Q01453 160 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 FOXD4Q12950 439 aaPredicted RBP8.93□□□□□ -0.98
NEDD9-211ENST00000508546 GRB7Q14451 532 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 PRPSAP1Q14558 356 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 SF1Q15637 639 aaKnown RBP8.93□□□□□ -0.98
NEDD9-211ENST00000508546 MUM1Q2TAK8 710 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 SYTL3Q4VX76 610 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 ANKRD20A2Q5SQ80 823 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 ANKRD20A1Q5TYW2 823 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 ANKRD20A3Q5VUR7 823 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 Q71RC1 249 aaPredicted RBP8.93□□□□□ -0.98
NEDD9-211ENST00000508546 DCUN1D3Q8IWE4 304 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 SLC22A15Q8IZD6 547 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 LMNTD1Q8N9Z9 388 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 PHF10Q8WUB8 498 aaKnown RBP8.93□□□□□ -0.98
NEDD9-211ENST00000508546 STYXQ8WUJ0 223 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 MVB12AQ96EY5 273 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 GPR137Q96N19 417 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 TBL1YQ9BQ87 522 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 FERMT1Q9BQL6 677 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 RAB11FIP5Q9BXF6 653 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 ZNF700Q9H0M5 742 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 C14orf105Q9NVL8 296 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 TEKT2Q9UIF3 430 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 RPH3AQ9Y2J0 694 aaPredicted RBP8.93□□□□□ -0.98
NEDD9-211ENST00000508546 HYOU1Q9Y4L1 999 aa8.93□□□□□ -0.98
NEDD9-211ENST00000508546 F8W8V4 182 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 H7C0C1 242 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 APOC4-APOC2K7ER74 178 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 RASGRF2O14827 1237 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 PRPF4O43172 522 aaKnown RBP eCLIP8.92□□□□□ -0.98
NEDD9-211ENST00000508546 SPOPO43791 374 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 GPC4O75487 556 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 APOC2P02655 101 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 CELA2AP08217 269 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 OR56A5P0C7T3 313 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 ATP5OP48047 213 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 UBASH3AP57075 661 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 TPM4P67936 248 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 EEF1A2Q05639 463 aaKnown RBP8.92□□□□□ -0.98
NEDD9-211ENST00000508546 DSG2Q14126 1118 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 PCOLCEQ15113 449 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 TCEAL1Q15170 157 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 PRTGQ2VWP7 1150 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 ZNF766Q5HY98 468 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 FRMPD2BQ6IN97 320 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 TMEM205Q6UW68 189 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 UNC5DQ6UXZ4 953 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 NAPRTQ6XQN6 538 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 MEX3BQ6ZN04 569 aaKnown RBP8.92□□□□□ -0.98
NEDD9-211ENST00000508546 ARHGEF18Q6ZSZ5 1173 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 MICALCLQ6ZW33 695 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 BBS12Q6ZW61 710 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 RNF44Q7L0R7 432 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 TAX1BP1Q86VP1 789 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 RCOR2Q8IZ40 523 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 C2orf73Q8N5S3 287 aaPredicted RBP8.92□□□□□ -0.98
NEDD9-211ENST00000508546 LRRC45Q96CN5 670 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 HAUS1Q96CS2 278 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 IMMP1LQ96LU5 166 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 C10orf90Q96M02 699 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 TGIF2Q9GZN2 237 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 CXXC4Q9H2H0 198 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 STMN3Q9NZ72 180 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 ZC3H7BQ9UGR2 993 aaKnown RBP8.92□□□□□ -0.98
NEDD9-211ENST00000508546 CDC14AQ9UNH5 594 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.92□□□□□ -0.98
NEDD9-211ENST00000508546 SCN3AQ9NY46 2000 aa8.92□□□□□ -0.98
NEDD9-211ENST00000508546 ZNF407Q9C0G0 2248 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 LOC105369274A0A096LPK9 316 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 LOC102723532A0A0G2JNH3 316 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 ASPDHA6ND91 283 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 RCCD1A6NED2 376 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 E9PLN8 166 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 TTI1O43156 1089 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 AKR1B10O60218 316 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 HEXBP07686 556 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 IGFBP2P18065 325 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 MSNP26038 577 aaKnown RBP8.91□□□□□ -0.98
NEDD9-211ENST00000508546 CCR7P32248 378 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 FOXN2P32314 431 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms