RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 FASTKD3Q14CZ7 662 aaKnown RBP19.07■□□□□ 0.64
SFXN1-209ENST00000508290 DEFB109BQ30KR1 87 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 RBM20Q5T481 1227 aaKnown RBP19.07■□□□□ 0.64
SFXN1-209ENST00000508290 PRAMEF17Q5VTA0 474 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 ICE2Q659A1 982 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 C8orf74Q6P047 294 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 ZNF843Q8N446 348 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 ZNF655Q8N720 491 aaPredicted RBP19.07■□□□□ 0.64
SFXN1-209ENST00000508290 MNS1Q8NEH6 495 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 LINGO1Q96FE5 620 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 IP6K3Q96PC2 410 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 GBP5Q96PP8 586 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 ZFYVE21Q9BQ24 234 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 DPH7Q9BTV6 452 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 FAM129AQ9BZQ8 928 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 SPRTNQ9H040 489 aaPredicted RBP19.07■□□□□ 0.64
SFXN1-209ENST00000508290 AKIRIN1Q9H9L7 192 aaPredicted RBP19.07■□□□□ 0.64
SFXN1-209ENST00000508290 POPDC3Q9HBV1 291 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 SAYSD1Q9NPB0 183 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 CCDC177Q9NQR7 707 aaPredicted RBP19.07■□□□□ 0.64
SFXN1-209ENST00000508290 TXNDC16Q9P2K2 825 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 GPN3Q9UHW5 284 aaPredicted RBP19.07■□□□□ 0.64
SFXN1-209ENST00000508290 TCFL5Q9UL49 500 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 ATMQ13315 3056 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 CDC14CA4D256 554 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 URI1O94763 535 aaPredicted RBP19.06■□□□□ 0.64
SFXN1-209ENST00000508290 FAM87AP0C7U9 286 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 EZRP15311 586 aaKnown RBP19.06■□□□□ 0.64
SFXN1-209ENST00000508290 PSMB5P28074 263 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 GCGRP47871 477 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 FASTKQ14296 549 aaKnown RBP19.06■□□□□ 0.64
SFXN1-209ENST00000508290 FAM198BQ6UWH4 519 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 CEP128Q6ZU80 1094 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 STRA8Q7Z7C7 330 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 ZC3HC1Q86WB0 502 aaKnown RBP19.06■□□□□ 0.64
SFXN1-209ENST00000508290 APLFQ8IW19 511 aaPredicted RBP19.06■□□□□ 0.64
SFXN1-209ENST00000508290 FAM20CQ8IXL6 584 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 NKAPQ8N5F7 415 aaKnown RBP19.06■□□□□ 0.64
SFXN1-209ENST00000508290 ENDOVQ8N8Q3 282 aaKnown RBP19.06■□□□□ 0.64
SFXN1-209ENST00000508290 EXD3Q8N9H8 876 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 ATL1Q8WXF7 558 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 FKBP10Q96AY3 582 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 RNF31Q96EP0 1072 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 PLCD4Q9BRC7 762 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 SLC25A18Q9H1K4 315 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 RHOJQ9H4E5 214 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 NDOR1Q9UHB4 597 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 TAC3Q9UHF0 121 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 MAN2B2Q9Y2E5 1009 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 KLHL20Q9Y2M5 609 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 KCNMB2Q9Y691 235 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 KALRNO60229 2985 aa19.06■□□□□ 0.64
SFXN1-209ENST00000508290 TXNDC9O14530 226 aa19.05■□□□□ 0.64
SFXN1-209ENST00000508290 HCRTR1O43613 425 aa19.05■□□□□ 0.64
SFXN1-209ENST00000508290 C1QL1O75973 258 aa19.05■□□□□ 0.64
SFXN1-209ENST00000508290 ONECUT2O95948 504 aa19.05■□□□□ 0.64
SFXN1-209ENST00000508290 CAPN1P07384 714 aa19.05■□□□□ 0.64
SFXN1-209ENST00000508290 IMPA1P29218 277 aa19.05■□□□□ 0.64
SFXN1-209ENST00000508290 PMS2P54278 862 aa19.05■□□□□ 0.64
SFXN1-209ENST00000508290 PLTPP55058 493 aa19.05■□□□□ 0.64
SFXN1-209ENST00000508290 PTCHD3Q3KNS1 767 aa19.05■□□□□ 0.64
SFXN1-209ENST00000508290 NKAIN1Q4KMZ8 207 aa19.05■□□□□ 0.64
SFXN1-209ENST00000508290 THEMIS2Q5TEJ8 643 aa19.05■□□□□ 0.64
SFXN1-209ENST00000508290 SUSD1Q6UWL2 747 aa19.05■□□□□ 0.64
SFXN1-209ENST00000508290 NACC2Q96BF6 587 aa19.05■□□□□ 0.64
SFXN1-209ENST00000508290 ACAT2Q9BWD1 397 aa19.05■□□□□ 0.64
SFXN1-209ENST00000508290 STARD5Q9NSY2 213 aa19.05■□□□□ 0.64
SFXN1-209ENST00000508290 IFT80Q9P2H3 777 aaPredicted RBP19.05■□□□□ 0.64
SFXN1-209ENST00000508290 PDE10AQ9Y233 779 aa19.05■□□□□ 0.64
SFXN1-209ENST00000508290 SMG1Q96Q15 3661 aaKnown RBP19.04■□□□□ 0.64
SFXN1-209ENST00000508290 KRT87PA6NCN2 255 aa19.04■□□□□ 0.64
SFXN1-209ENST00000508290 B8ZZF3 427 aa19.04■□□□□ 0.64
SFXN1-209ENST00000508290 DSCR3O14972 297 aa19.04■□□□□ 0.64
SFXN1-209ENST00000508290 CTSVO60911 334 aa19.04■□□□□ 0.64
SFXN1-209ENST00000508290 TSPAN12O95859 305 aa19.04■□□□□ 0.64
SFXN1-209ENST00000508290 IGHEP01854 428 aa19.04■□□□□ 0.64
SFXN1-209ENST00000508290 ALBP02768 609 aa19.04■□□□□ 0.64
SFXN1-209ENST00000508290 ZNF37AP17032 561 aaPredicted RBP19.04■□□□□ 0.64
SFXN1-209ENST00000508290 SLC12A2P55011 1212 aa19.04■□□□□ 0.64
SFXN1-209ENST00000508290 MRPS25P82663 173 aaKnown RBP19.04■□□□□ 0.64
SFXN1-209ENST00000508290 TSTA3Q13630 321 aaPredicted RBP19.04■□□□□ 0.64
SFXN1-209ENST00000508290 ZNF425Q6IV72 752 aa19.04■□□□□ 0.64
SFXN1-209ENST00000508290 RAB43Q86YS6 212 aa19.04■□□□□ 0.64
SFXN1-209ENST00000508290 LRRC56Q8IYG6 542 aaPredicted RBP19.04■□□□□ 0.64
SFXN1-209ENST00000508290 TRIM44Q96DX7 344 aaPredicted RBP19.04■□□□□ 0.64
SFXN1-209ENST00000508290 TSPAN17Q96FV3 270 aa19.04■□□□□ 0.64
SFXN1-209ENST00000508290 TSPYL1Q9H0U9 437 aa19.04■□□□□ 0.64
SFXN1-209ENST00000508290 SLC6A20Q9NP91 592 aa19.04■□□□□ 0.64
SFXN1-209ENST00000508290 CUTCQ9NTM9 273 aa19.04■□□□□ 0.64
SFXN1-209ENST00000508290 STOX2Q9P2F5 926 aaPredicted RBP19.04■□□□□ 0.64
SFXN1-209ENST00000508290 SLC17A6Q9P2U8 582 aa19.04■□□□□ 0.64
SFXN1-209ENST00000508290 NXT1Q9UKK6 140 aaKnown RBP19.04■□□□□ 0.64
SFXN1-209ENST00000508290 NOVA2Q9UNW9 492 aaKnown RBP19.04■□□□□ 0.64
SFXN1-209ENST00000508290 FAM95CA0A1B0GW59 222 aa19.03■□□□□ 0.64
SFXN1-209ENST00000508290 MKRN2OSH3BPM6 223 aa19.03■□□□□ 0.64
SFXN1-209ENST00000508290 RFPL1O75677 317 aa19.03■□□□□ 0.64
SFXN1-209ENST00000508290 PRB1P04280 392 aa19.03■□□□□ 0.64
SFXN1-209ENST00000508290 POU4F1Q01851 419 aa19.03■□□□□ 0.64
SFXN1-209ENST00000508290 NAB1Q13506 487 aa19.03■□□□□ 0.64
SFXN1-209ENST00000508290 MUM1Q2TAK8 710 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms