RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 GSCP56915 257 aaPredicted RBP4.22□□□□□ -1.73
DHFR-204ENST00000508282 KRTAP10-3P60369 221 aa4.22□□□□□ -1.73
DHFR-204ENST00000508282 C2CD6Q53TS8 623 aa4.22□□□□□ -1.73
DHFR-204ENST00000508282 BMP2KLQ5H9B9 411 aa4.22□□□□□ -1.73
DHFR-204ENST00000508282 C1QTNF12Q5T7M4 302 aa4.22□□□□□ -1.73
DHFR-204ENST00000508282 C6orf163Q5TEZ5 329 aa4.22□□□□□ -1.73
DHFR-204ENST00000508282 LCN1P1Q5VSP4 162 aa4.22□□□□□ -1.73
DHFR-204ENST00000508282 SPEM1Q8N4L4 309 aa4.22□□□□□ -1.73
DHFR-204ENST00000508282 ZNF519Q8TB69 540 aa4.22□□□□□ -1.73
DHFR-204ENST00000508282 GATAD1Q8WUU5 269 aa4.22□□□□□ -1.73
DHFR-204ENST00000508282 APOBEC4Q8WW27 367 aaKnown RBP4.22□□□□□ -1.73
DHFR-204ENST00000508282 ATL1Q8WXF7 558 aa4.22□□□□□ -1.73
DHFR-204ENST00000508282 OMA1Q96E52 524 aa4.22□□□□□ -1.73
DHFR-204ENST00000508282 ZNF486Q96H40 463 aaPredicted RBP4.22□□□□□ -1.73
DHFR-204ENST00000508282 CCDC3Q9BQI4 270 aa4.22□□□□□ -1.73
DHFR-204ENST00000508282 DCTN5Q9BTE1 182 aa4.22□□□□□ -1.73
DHFR-204ENST00000508282 CCDC106Q9BWC9 280 aa4.22□□□□□ -1.73
DHFR-204ENST00000508282 UPF3AQ9H1J1 476 aaKnown RBP4.22□□□□□ -1.73
DHFR-204ENST00000508282 ALDH8A1Q9H2A2 487 aaPredicted RBP4.22□□□□□ -1.73
DHFR-204ENST00000508282 TLE6Q9H808 572 aa4.22□□□□□ -1.73
DHFR-204ENST00000508282 NOL11Q9H8H0 719 aaKnown RBP4.22□□□□□ -1.73
DHFR-204ENST00000508282 IL17BQ9UHF5 180 aa4.22□□□□□ -1.73
DHFR-204ENST00000508282 hCG_1809904A0A1W2PP81 198 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 A0A1W2PPE2 198 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 A0A1W2PR64 198 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 FAM170AA1A519 330 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 KPNA7A9QM74 516 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 TRIM77I1YAP6 450 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 ARPC2O15144 300 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 STARD3NLO95772 234 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 ABCB1P08183 1280 aaPredicted RBP4.21□□□□□ -1.74
DHFR-204ENST00000508282 SLC2A2P11168 524 aaPredicted RBP4.21□□□□□ -1.74
DHFR-204ENST00000508282 GATA1P15976 413 aaPredicted RBP4.21□□□□□ -1.74
DHFR-204ENST00000508282 CCR10P46092 362 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 LMAN1P49257 510 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 HUNKP57058 714 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 CSNK2BP67870 215 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 ITGA7Q13683 1181 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 MCMDC2Q4G0Z9 681 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 GLIPR1L2Q4G1C9 344 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 TAF1BQ53T94 588 aaPredicted RBP4.21□□□□□ -1.74
DHFR-204ENST00000508282 CAMKMTQ7Z624 323 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 LGI2Q8N0V4 545 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 PRSS33Q8NF86 280 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 TEKT4Q8WW24 435 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 APOL6Q9BWW8 343 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 WWTR1Q9GZV5 400 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 SH3GLB2Q9NR46 395 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 SPHK2Q9NRA0 654 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 SLC24A2Q9UI40 661 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 ANAPC2Q9UJX6 822 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 RNF150Q9ULK6 438 aa4.21□□□□□ -1.74
DHFR-204ENST00000508282 COL5A2P05997 1499 aaPredicted RBP4.21□□□□□ -1.74
DHFR-204ENST00000508282 SOCS3O14543 225 aa4.2□□□□□ -1.74
DHFR-204ENST00000508282 PTGESO14684 152 aa4.2□□□□□ -1.74
DHFR-204ENST00000508282 P4HA2O15460 535 aa4.2□□□□□ -1.74
DHFR-204ENST00000508282 NR2F1P10589 423 aa4.2□□□□□ -1.74
DHFR-204ENST00000508282 IFI35P80217 286 aaPredicted RBP4.2□□□□□ -1.74
DHFR-204ENST00000508282 GUCY2DQ02846 1103 aa4.2□□□□□ -1.74
DHFR-204ENST00000508282 VEZF1Q14119 521 aa4.2□□□□□ -1.74
DHFR-204ENST00000508282 PSMD6Q15008 389 aa4.2□□□□□ -1.74
DHFR-204ENST00000508282 EXT1Q16394 746 aa4.2□□□□□ -1.74
DHFR-204ENST00000508282 TC2NQ8N9U0 490 aa4.2□□□□□ -1.74
DHFR-204ENST00000508282 AVL9Q8NBF6 648 aa4.2□□□□□ -1.74
DHFR-204ENST00000508282 OR6S1Q8NH40 331 aa4.2□□□□□ -1.74
DHFR-204ENST00000508282 GTF3AQ92664 365 aaKnown RBP4.2□□□□□ -1.74
DHFR-204ENST00000508282 ZNF300Q96RE9 604 aaPredicted RBP4.2□□□□□ -1.74
DHFR-204ENST00000508282 LRRC61Q9BV99 259 aa4.2□□□□□ -1.74
DHFR-204ENST00000508282 Q9H8V8 135 aa4.2□□□□□ -1.74
DHFR-204ENST00000508282 CNOT10Q9H9A5 744 aaKnown RBP4.2□□□□□ -1.74
DHFR-204ENST00000508282 RPS10P5Q9NQ39 176 aa4.2□□□□□ -1.74
DHFR-204ENST00000508282 NUDT4Q9NZJ9 180 aa4.2□□□□□ -1.74
DHFR-204ENST00000508282 NFKBIL1Q9UBC1 381 aaPredicted RBP4.2□□□□□ -1.74
DHFR-204ENST00000508282 MAN1B1Q9UKM7 699 aa4.2□□□□□ -1.74
DHFR-204ENST00000508282 KLK13Q9UKR3 277 aa4.2□□□□□ -1.74
DHFR-204ENST00000508282 WDR83OSQ9Y284 106 aa4.2□□□□□ -1.74
DHFR-204ENST00000508282 PASKQ96RG2 1323 aa4.2□□□□□ -1.74
DHFR-204ENST00000508282 MPTX1A8MV57 137 aa4.19□□□□□ -1.74
DHFR-204ENST00000508282 EPM2AB3EWF7 344 aa4.19□□□□□ -1.74
DHFR-204ENST00000508282 FPGTO14772 594 aa4.19□□□□□ -1.74
DHFR-204ENST00000508282 DNTTP04053 509 aa4.19□□□□□ -1.74
DHFR-204ENST00000508282 GP1BBP13224 206 aa4.19□□□□□ -1.74
DHFR-204ENST00000508282 LHCGRP22888 699 aa4.19□□□□□ -1.74
DHFR-204ENST00000508282 GATA2P23769 480 aaPredicted RBP4.19□□□□□ -1.74
DHFR-204ENST00000508282 SHC1P29353 583 aa4.19□□□□□ -1.74
DHFR-204ENST00000508282 LBX1P52954 281 aa4.19□□□□□ -1.74
DHFR-204ENST00000508282 KLC1Q07866 573 aa4.19□□□□□ -1.74
DHFR-204ENST00000508282 NFATC2Q13469 925 aa4.19□□□□□ -1.74
DHFR-204ENST00000508282 ZNF74Q16587 644 aa4.19□□□□□ -1.74
DHFR-204ENST00000508282 PHKG1Q16816 387 aa4.19□□□□□ -1.74
DHFR-204ENST00000508282 VWC2Q2TAL6 325 aa4.19□□□□□ -1.74
DHFR-204ENST00000508282 NKAIN3Q8N8D7 197 aa4.19□□□□□ -1.74
DHFR-204ENST00000508282 OR4K1Q8NGD4 311 aa4.19□□□□□ -1.74
DHFR-204ENST00000508282 OR10Q1Q8NGQ4 319 aa4.19□□□□□ -1.74
DHFR-204ENST00000508282 MAPK15Q8TD08 544 aa4.19□□□□□ -1.74
DHFR-204ENST00000508282 C4orf45Q96LM5 186 aa4.19□□□□□ -1.74
DHFR-204ENST00000508282 ZMAT2Q96NC0 199 aaKnown RBP4.19□□□□□ -1.74
DHFR-204ENST00000508282 FAM49AQ9H0Q0 323 aaPredicted RBP4.19□□□□□ -1.74
DHFR-204ENST00000508282 CHST11Q9NPF2 352 aa4.19□□□□□ -1.74
DHFR-204ENST00000508282 THEGQ9P2T0 379 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms