RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 CATP04040 527 aaKnown RBP13.66□□□□□ -0.22
RAB28-205ENST00000508274 HSP90AA5PQ58FG0 334 aa13.66□□□□□ -0.22
RAB28-205ENST00000508274 SHISA6Q6ZSJ9 500 aa13.66□□□□□ -0.22
RAB28-205ENST00000508274 RNF44Q7L0R7 432 aa13.66□□□□□ -0.22
RAB28-205ENST00000508274 TTC29Q8NA56 475 aaPredicted RBP13.66□□□□□ -0.22
RAB28-205ENST00000508274 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.66□□□□□ -0.22
RAB28-205ENST00000508274 CD200R1Q8TD46 325 aa13.66□□□□□ -0.22
RAB28-205ENST00000508274 KCNJ9Q92806 393 aa13.66□□□□□ -0.22
RAB28-205ENST00000508274 FKBP10Q96AY3 582 aa13.66□□□□□ -0.22
RAB28-205ENST00000508274 SPSB2Q99619 263 aa13.66□□□□□ -0.22
RAB28-205ENST00000508274 SMAD5Q99717 465 aaKnown RBP13.66□□□□□ -0.22
RAB28-205ENST00000508274 CCDC68Q9H2F9 335 aa13.66□□□□□ -0.22
RAB28-205ENST00000508274 ENAMQ9NRM1 1142 aa13.66□□□□□ -0.22
RAB28-205ENST00000508274 IARS2Q9NSE4 1012 aaKnown RBP13.66□□□□□ -0.22
RAB28-205ENST00000508274 ABCF3Q9NUQ8 709 aa13.66□□□□□ -0.22
RAB28-205ENST00000508274 ZC3H7BQ9UGR2 993 aaKnown RBP13.66□□□□□ -0.22
RAB28-205ENST00000508274 ASIC3Q9UHC3 531 aa13.66□□□□□ -0.22
RAB28-205ENST00000508274 TAC3Q9UHF0 121 aa13.66□□□□□ -0.22
RAB28-205ENST00000508274 FAM169AQ9Y6X4 670 aa13.66□□□□□ -0.22
RAB28-205ENST00000508274 LRRK2Q5S007 2527 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 TTLL8A6PVC2 850 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 CYSRT1A8MQ03 144 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 CES2O00748 559 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 DNALI1O14645 258 aaPredicted RBP13.65□□□□□ -0.22
RAB28-205ENST00000508274 SORBS2O94875 1100 aaKnown RBP13.65□□□□□ -0.22
RAB28-205ENST00000508274 HAUS5O94927 633 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 SYF2O95926 243 aaKnown RBP13.65□□□□□ -0.22
RAB28-205ENST00000508274 EIF2S1P05198 315 aaKnown RBP13.65□□□□□ -0.22
RAB28-205ENST00000508274 CMPK1P30085 196 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 UQCRFS1P47985 274 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 CD97P48960 835 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 PNLIPRP1P54315 467 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 SRSF1Q07955 248 aaKnown RBP eCLIP13.65□□□□□ -0.22
RAB28-205ENST00000508274 DHX9Q08211 1270 aaKnown RBP13.65□□□□□ -0.22
RAB28-205ENST00000508274 CRYMQ14894 314 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 NKG7Q16617 165 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 TTLL9Q3SXZ7 439 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 MSS51Q4VC12 460 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 PRR30Q53SZ7 412 aaPredicted RBP13.65□□□□□ -0.22
RAB28-205ENST00000508274 FBXO42Q6P3S6 717 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 NEK10Q6ZWH5 1172 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 OVCH1Q7RTY7 1134 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 PIWIL4Q7Z3Z4 852 aaKnown RBP13.65□□□□□ -0.22
RAB28-205ENST00000508274 KCNMB4Q86W47 210 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 CPNE9Q8IYJ1 553 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 RBMXL3Q8N7X1 1067 aaKnown RBP13.65□□□□□ -0.22
RAB28-205ENST00000508274 Q8NA96 180 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 ZNF480Q8WV37 535 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 SMPDL3AQ92484 453 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 FER1L6-AS2Q96M78 137 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 NDNQ99608 321 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 ZFYVE21Q9BQ24 234 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 SOX17Q9H6I2 414 aaPredicted RBP13.65□□□□□ -0.22
RAB28-205ENST00000508274 MRPS30Q9NP92 439 aaKnown RBP13.65□□□□□ -0.22
RAB28-205ENST00000508274 FAM114A2Q9NRY5 505 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 DHRS7Q9Y394 339 aa13.65□□□□□ -0.22
RAB28-205ENST00000508274 HYKKA2RU49 373 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 PEX12O00623 359 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 SRPX2O60687 465 aaPredicted RBP13.64□□□□□ -0.23
RAB28-205ENST00000508274 ONECUT2O95948 504 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 CD63P08962 238 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 ERVK-10P10266 1014 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 PGAM1P18669 254 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 RPA3P35244 121 aaPredicted RBP13.64□□□□□ -0.23
RAB28-205ENST00000508274 TIAL1Q01085 375 aaKnown RBP eCLIP13.64□□□□□ -0.23
RAB28-205ENST00000508274 PTK6Q13882 451 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 SLC6A19Q695T7 634 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 JMJD6Q6NYC1 403 aaPredicted RBP13.64□□□□□ -0.23
RAB28-205ENST00000508274 CYHR1Q6ZMK1 362 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 GALNT16Q8N428 558 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 CLEC1AQ8NC01 280 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 CPT1CQ8TCG5 803 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 CALML6Q8TD86 181 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 ASB11Q8WXH4 323 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 CAPZA3Q96KX2 299 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 C10orf90Q96M02 699 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 IP6K3Q96PC2 410 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 PLCD4Q9BRC7 762 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 MESP1Q9BRJ9 268 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 FAM167BQ9BTA0 163 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 AARSD1Q9BTE6 412 aaKnown RBP13.64□□□□□ -0.23
RAB28-205ENST00000508274 SLC17A6Q9P2U8 582 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 G3BP2Q9UN86 482 aaKnown RBP13.64□□□□□ -0.23
RAB28-205ENST00000508274 PCDHGB7Q9Y5F8 929 aa13.64□□□□□ -0.23
RAB28-205ENST00000508274 RP1L1Q8IWN7 2480 aaPredicted RBP13.64□□□□□ -0.23
RAB28-205ENST00000508274 H0YGG7 62 aa13.63□□□□□ -0.23
RAB28-205ENST00000508274 DPM1O60762 260 aa13.63□□□□□ -0.23
RAB28-205ENST00000508274 ALBP02768 609 aa13.63□□□□□ -0.23
RAB28-205ENST00000508274 MPC1LP0DKB6 136 aa13.63□□□□□ -0.23
RAB28-205ENST00000508274 ARF3P61204 181 aaPredicted RBP13.63□□□□□ -0.23
RAB28-205ENST00000508274 ARHGAP19Q14CB8 494 aa13.63□□□□□ -0.23
RAB28-205ENST00000508274 FAM214AQ32MH5 1076 aa13.63□□□□□ -0.23
RAB28-205ENST00000508274 VWA5B1Q5TIE3 1220 aa13.63□□□□□ -0.23
RAB28-205ENST00000508274 YOD1Q5VVQ6 348 aaPredicted RBP13.63□□□□□ -0.23
RAB28-205ENST00000508274 ICE2Q659A1 982 aa13.63□□□□□ -0.23
RAB28-205ENST00000508274 PAQR7Q86WK9 346 aa13.63□□□□□ -0.23
RAB28-205ENST00000508274 IGDCC3Q8IVU1 814 aa13.63□□□□□ -0.23
RAB28-205ENST00000508274 LMNTD2Q8IXW0 634 aa13.63□□□□□ -0.23
RAB28-205ENST00000508274 LRRC56Q8IYG6 542 aaPredicted RBP13.63□□□□□ -0.23
RAB28-205ENST00000508274 PWWP2AQ96N64 755 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms