RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 TYRP1P17643 537 aa16.86■□□□□ 0.29
RNF4-209ENST00000507784 AMD1P17707 334 aa16.86■□□□□ 0.29
RNF4-209ENST00000507784 HK2P52789 917 aa16.86■□□□□ 0.29
RNF4-209ENST00000507784 DOC2AQ14183 400 aa16.86■□□□□ 0.29
RNF4-209ENST00000507784 SF1Q15637 639 aaKnown RBP16.86■□□□□ 0.29
RNF4-209ENST00000507784 CATSPEREQ5SY80 951 aa16.86■□□□□ 0.29
RNF4-209ENST00000507784 GKAP1Q5VSY0 366 aaPredicted RBP16.86■□□□□ 0.29
RNF4-209ENST00000507784 KANK2Q63ZY3 851 aa16.86■□□□□ 0.29
RNF4-209ENST00000507784 KANSL1Q7Z3B3 1105 aa16.86■□□□□ 0.29
RNF4-209ENST00000507784 ADGRF3Q8IZF5 1079 aa16.86■□□□□ 0.29
RNF4-209ENST00000507784 MINDY1Q8N5J2 469 aa16.86■□□□□ 0.29
RNF4-209ENST00000507784 EID2Q8N6I1 236 aa16.86■□□□□ 0.29
RNF4-209ENST00000507784 ARL10Q8N8L6 244 aa16.86■□□□□ 0.29
RNF4-209ENST00000507784 CCT6BQ92526 530 aa16.86■□□□□ 0.29
RNF4-209ENST00000507784 DUSP23Q9BVJ7 150 aa16.86■□□□□ 0.29
RNF4-209ENST00000507784 TRPS1Q9UHF7 1281 aa16.86■□□□□ 0.29
RNF4-209ENST00000507784 ZNF225Q9UK10 706 aa16.86■□□□□ 0.29
RNF4-209ENST00000507784 SH2B3Q9UQQ2 575 aa16.86■□□□□ 0.29
RNF4-209ENST00000507784 HDAC3O15379 428 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 SNX3O60493 162 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 CCNDBP1O95273 360 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 C1GALT1C1LP0DN25 315 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 CDH1P12830 882 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 VARSP26640 1264 aaKnown RBP16.85■□□□□ 0.29
RNF4-209ENST00000507784 CMPK1P30085 196 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 PEBP1P30086 187 aaKnown RBP16.85■□□□□ 0.29
RNF4-209ENST00000507784 FASLGP48023 281 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 GABPB1Q06547 395 aaPredicted RBP16.85■□□□□ 0.29
RNF4-209ENST00000507784 CPSF6Q16630 551 aaKnown RBP eCLIP16.85■□□□□ 0.29
RNF4-209ENST00000507784 SGO1Q5FBB7 561 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 PLA2G2CQ5R387 149 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 VWA5B1Q5TIE3 1220 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 LIPJQ5W064 366 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 ICE2Q659A1 982 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 SCIMPQ6UWF3 145 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 NXPE4Q6UWF7 544 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 SLCO4C1Q6ZQN7 724 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 EFL1Q7Z2Z2 1120 aaKnown RBP16.85■□□□□ 0.29
RNF4-209ENST00000507784 PIGWQ7Z7B1 504 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 OOSP2Q86WS3 158 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 C17orf82Q86X59 251 aaPredicted RBP16.85■□□□□ 0.29
RNF4-209ENST00000507784 DDIASQ8IXT1 998 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 SLC35F3Q8IY50 421 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 MTFMTQ96DP5 389 aaKnown RBP16.85■□□□□ 0.29
RNF4-209ENST00000507784 MAGEB10Q96LZ2 347 aaPredicted RBP16.85■□□□□ 0.29
RNF4-209ENST00000507784 TMEM120AQ9BXJ8 343 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 NUF2Q9BZD4 464 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 MRPS30Q9NP92 439 aaKnown RBP16.85■□□□□ 0.29
RNF4-209ENST00000507784 HRASLS2Q9NWW9 162 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 ACTR10Q9NZ32 417 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 LRIT1Q9P2V4 623 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 PADI4Q9UM07 663 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 BTRCQ9Y297 605 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 RNF215Q9Y6U7 377 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 VCANP13611 3396 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 ZNF318Q5VUA4 2279 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 CACNA1EQ15878 2313 aa16.85■□□□□ 0.29
RNF4-209ENST00000507784 FAM221BA6H8Z2 402 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 TRPC5OSA6NMA1 111 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 MATN2O00339 956 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 TRIM38O00635 465 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 HGSO14964 777 aaPredicted RBP16.84■□□□□ 0.29
RNF4-209ENST00000507784 PRAMEF4O60810 478 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 DIAPH2O60879 1101 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 YBX1P67809 324 aaKnown RBP16.84■□□□□ 0.29
RNF4-209ENST00000507784 KIR2DS3Q14952 304 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 NR0B2Q15466 257 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 TERF2Q15554 542 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 HIST2H2ACQ16777 129 aaPredicted RBP16.84■□□□□ 0.29
RNF4-209ENST00000507784 TCHHL1Q5QJ38 904 aaPredicted RBP16.84■□□□□ 0.29
RNF4-209ENST00000507784 PRAMEF9Q5VWM5 478 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 HIST2H2AA3Q6FI13 130 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 ZCCHC8Q6NZY4 707 aaKnown RBP16.84■□□□□ 0.29
RNF4-209ENST00000507784 ADCK2Q7Z695 626 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 FAM20CQ8IXL6 584 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 L3MBTL4Q8NA19 623 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 OR2A1Q8NGT9 310 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 OR4C6Q8NH72 309 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 TWIST2Q8WVJ9 160 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 SLC22A18Q96BI1 424 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 PTCD3Q96EY7 689 aaKnown RBP16.84■□□□□ 0.29
RNF4-209ENST00000507784 PRR11Q96HE9 360 aaPredicted RBP16.84■□□□□ 0.29
RNF4-209ENST00000507784 SEC16BQ96JE7 1060 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 RILPQ96NA2 401 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 UCK1Q9HA47 277 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 FAM86C1Q9NVL1 165 aa16.84■□□□□ 0.29
RNF4-209ENST00000507784 CUEDC1Q9NWM3 386 aaPredicted RBP16.84■□□□□ 0.29
RNF4-209ENST00000507784 C2orf74A8MZ97 194 aa16.83■□□□□ 0.28
RNF4-209ENST00000507784 SIGLEC6O43699 453 aa16.83■□□□□ 0.28
RNF4-209ENST00000507784 PRICKLE3O43900 615 aaPredicted RBP16.83■□□□□ 0.28
RNF4-209ENST00000507784 UBXN7O94888 489 aa16.83■□□□□ 0.28
RNF4-209ENST00000507784 PROS1P07225 676 aa16.83■□□□□ 0.28
RNF4-209ENST00000507784 PCNAP12004 261 aa16.83■□□□□ 0.28
RNF4-209ENST00000507784 JUPP14923 745 aa16.83■□□□□ 0.28
RNF4-209ENST00000507784 ALDH4A1P30038 563 aa16.83■□□□□ 0.28
RNF4-209ENST00000507784 HNF4AP41235 474 aa16.83■□□□□ 0.28
RNF4-209ENST00000507784 IDH3AP50213 366 aa16.83■□□□□ 0.28
RNF4-209ENST00000507784 ABATP80404 500 aa16.83■□□□□ 0.28
RNF4-209ENST00000507784 MEF2AQ02078 507 aaPredicted RBP16.83■□□□□ 0.28
RNF4-209ENST00000507784 BTKQ06187 659 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms