RNA–Protein interactions for RNA: ENST00000507761.1

LINC01088-204, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 842 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-204ENST00000507761 TDRD1Q9BXT4 1180 aaKnown RBP2.78□□□□□ -1.96
LINC01088-204ENST00000507761 TEX12Q9BXU0 123 aa2.78□□□□□ -1.96
LINC01088-204ENST00000507761 SPATC1LQ9H0A9 340 aa2.78□□□□□ -1.96
LINC01088-204ENST00000507761 GPN1Q9HCN4 374 aaPredicted RBP2.78□□□□□ -1.96
LINC01088-204ENST00000507761 BCCIPQ9P287 314 aaKnown RBP eCLIP2.78□□□□□ -1.96
LINC01088-204ENST00000507761 ADD3Q9UEY8 706 aaKnown RBP2.78□□□□□ -1.96
LINC01088-204ENST00000507761 C19orf25Q9UFG5 118 aaPredicted RBP2.78□□□□□ -1.96
LINC01088-204ENST00000507761 GPR34Q9UPC5 381 aa2.78□□□□□ -1.96
LINC01088-204ENST00000507761 ZNF644Q9H582 1327 aaPredicted RBP2.77□□□□□ -1.97
LINC01088-204ENST00000507761 SHISA7A6NL88 538 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 TSPAN1O60635 241 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 CEACAM4O75871 244 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 CSH1P0DML2 217 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 CSH2P0DML3 217 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 PDHA2P29803 388 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 TM4SF1P30408 202 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 MAPK4P31152 587 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 CSTF2P33240 577 aaKnown RBP eCLIP2.77□□□□□ -1.97
LINC01088-204ENST00000507761 HOXD13P35453 343 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 ETV5P41161 510 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 SLC9A3P48764 834 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 ARSEP51690 589 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 LBX1P52954 281 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 XGP55808 180 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 KRTAP10-1P60331 282 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 CXCL9Q07325 125 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 MEA1Q16626 185 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 DUSP28Q4G0W2 176 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 SLC35D3Q5M8T2 416 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 UGT3A1Q6NUS8 523 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 VITQ6UXI7 678 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 CDHR3Q6ZTQ4 885 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 SZRD1Q7Z422 152 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 DHX58Q96C10 678 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 NSUN4Q96CB9 384 aaKnown RBP2.77□□□□□ -1.97
LINC01088-204ENST00000507761 GHITMQ9H3K2 345 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 GKN1Q9NS71 199 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 ARHGEF38Q9NXL2 777 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 TBC1D29Q9UFV1 150 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 TSPAN16Q9UKR8 245 aa2.77□□□□□ -1.97
LINC01088-204ENST00000507761 COL16A1Q07092 1604 aaPredicted RBP2.77□□□□□ -1.97
LINC01088-204ENST00000507761 LOC100509620A0A075B734 347 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 A0A087WUV0 522 aaPredicted RBP2.76□□□□□ -1.97
LINC01088-204ENST00000507761 hCG_1807616A0A1W2PRN6 198 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 ANKUB1A6NFN9 424 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 SHISA9B4DS77 424 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 K7ENM7 598 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 CTDSP2O14595 271 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 IPO8O15397 1037 aaKnown RBP2.76□□□□□ -1.97
LINC01088-204ENST00000507761 GFPT2O94808 682 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 HPP00738 406 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 OR2T7P0C7T2 308 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 GJA1P17302 382 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 ACSL1P33121 698 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 GARSP41250 739 aaKnown RBP2.76□□□□□ -1.97
LINC01088-204ENST00000507761 SLC15A1P46059 708 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 EPS8Q12929 822 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 RAB41Q5JT25 222 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 CFAP58Q5T655 872 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 FAM198BQ6UWH4 519 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 PCGF5Q86SE9 256 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 ADCK1Q86TW2 530 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 FAM131BQ86XD5 332 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 TYMSOSQ8TAI1 123 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 MAP3K3Q99759 626 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 OVOL2Q9BRP0 275 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 HOXD1Q9GZZ0 328 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 TMX4Q9H1E5 349 aaPredicted RBP2.76□□□□□ -1.97
LINC01088-204ENST00000507761 OSGEPL1Q9H4B0 414 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 TRPV4Q9HBA0 871 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 PSD3Q9NYI0 1048 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 SUCLA2Q9P2R7 463 aaPredicted RBP2.76□□□□□ -1.97
LINC01088-204ENST00000507761 ZNF148Q9UQR1 794 aa2.76□□□□□ -1.97
LINC01088-204ENST00000507761 RSF1Q96T23 1441 aaPredicted RBP2.76□□□□□ -1.97
LINC01088-204ENST00000507761 IGHV4-30-2A0A087WSY4 118 aa2.75□□□□□ -1.97
LINC01088-204ENST00000507761 A0A1W2PQ09 198 aa2.75□□□□□ -1.97
LINC01088-204ENST00000507761 GALR3O60755 368 aaPredicted RBP2.75□□□□□ -1.97
LINC01088-204ENST00000507761 ZWINTO95229 277 aa2.75□□□□□ -1.97
LINC01088-204ENST00000507761 STARD3NLO95772 234 aa2.75□□□□□ -1.97
LINC01088-204ENST00000507761 PRKAR1AP10644 381 aa2.75□□□□□ -1.97
LINC01088-204ENST00000507761 RPL35AP18077 110 aaKnown RBP2.75□□□□□ -1.97
LINC01088-204ENST00000507761 ZNF415Q09FC8 603 aa2.75□□□□□ -1.97
LINC01088-204ENST00000507761 CDH18Q13634 790 aa2.75□□□□□ -1.97
LINC01088-204ENST00000507761 NTRK2Q16620 822 aa2.75□□□□□ -1.97
LINC01088-204ENST00000507761 C15orf59Q2T9L4 293 aaPredicted RBP2.75□□□□□ -1.97
LINC01088-204ENST00000507761 CFAP161Q6P656 301 aa2.75□□□□□ -1.97
LINC01088-204ENST00000507761 LCLAT1Q6UWP7 414 aa2.75□□□□□ -1.97
LINC01088-204ENST00000507761 LEKR1Q6ZMV7 388 aa2.75□□□□□ -1.97
LINC01088-204ENST00000507761 RAPH1Q70E73 1250 aa2.75□□□□□ -1.97
LINC01088-204ENST00000507761 BRINP3Q76B58 766 aa2.75□□□□□ -1.97
LINC01088-204ENST00000507761 CHMP1BQ7LBR1 199 aa2.75□□□□□ -1.97
LINC01088-204ENST00000507761 ZER1Q7Z7L7 766 aa2.75□□□□□ -1.97
LINC01088-204ENST00000507761 PHC2Q8IXK0 858 aa2.75□□□□□ -1.97
LINC01088-204ENST00000507761 KLHDC1Q8N7A1 406 aa2.75□□□□□ -1.97
LINC01088-204ENST00000507761 POC5Q8NA72 575 aa2.75□□□□□ -1.97
LINC01088-204ENST00000507761 APPL2Q8NEU8 664 aa2.75□□□□□ -1.97
LINC01088-204ENST00000507761 CNRIP1Q96F85 164 aaPredicted RBP2.75□□□□□ -1.97
LINC01088-204ENST00000507761 RSRC1Q96IZ7 334 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms