RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 SRPX2O60687 465 aaPredicted RBP11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 FGGP02679 453 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 EIF2S1P05198 315 aaKnown RBP11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 ERVK-10P10266 1014 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 TPSB2P20231 275 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 ATP5DP30049 168 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 CMPK1P30085 196 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 KCNJ1P48048 391 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 TERF1P54274 439 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 GBX1Q14549 363 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 TPSAB1Q15661 275 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 ACSBG2Q5FVE4 666 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 RNF187Q5TA31 235 aaPredicted RBP11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 AGAP7PQ5VUJ5 663 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 LRRC8BQ6P9F7 803 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 IGFL2Q6UWQ7 119 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 SDCCAG8Q86SQ7 713 aaPredicted RBP11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 OR11G2Q8NGC1 345 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 STT3BQ8TCJ2 826 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 MIEF2Q96C03 454 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 THOC3Q96J01 351 aaKnown RBP11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 CNDP1Q96KN2 507 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 C10orf90Q96M02 699 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 AGAP4Q96P64 663 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 BARD1Q99728 777 aaKnown RBP11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 ZFYVE21Q9BQ24 234 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 DPH7Q9BTV6 452 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 ACAT2Q9BWD1 397 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 LHPPQ9H008 270 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 ZNF304Q9HCX3 659 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 LZTFL1Q9NQ48 299 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 STOX2Q9P2F5 926 aaPredicted RBP11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 ZC3H7BQ9UGR2 993 aaKnown RBP11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 SOX13Q9UN79 622 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 SLC5A6Q9Y289 635 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 ZKSCAN5Q9Y2L8 839 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 CRYL1Q9Y2S2 319 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 CROCCQ5TZA2 2017 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 WIPF3A6NGB9 483 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 H3BMM5 538 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 MAP2K7O14733 419 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 MATN4O95460 622 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 CLDN1O95832 211 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 HPP00738 406 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 ESR1P03372 595 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 ZGLP1P0C6A0 271 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 ERGP11308 486 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 CHRM3P20309 590 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 OGNP20774 298 aaKnown RBP11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 FBLP22087 321 aaKnown RBP11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 COL8A1P27658 744 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 CARSP49589 748 aaKnown RBP11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 VPS41P49754 854 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 OCA2Q04671 838 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 KLC1Q07866 573 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 Q0VFX4 171 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 TSTA3Q13630 321 aaPredicted RBP11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 NAA25Q14CX7 972 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 MUM1Q2TAK8 710 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 KIAA0930Q6ICG6 404 aaPredicted RBP11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 PRMT9Q6P2P2 845 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 SUSD1Q6UWL2 747 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 MAMDC2Q7Z304 686 aaPredicted RBP11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 OR9A1PQ8NGU1 263 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 DNAJB14Q8TBM8 379 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 MAIP1Q8WWC4 291 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 VPS50Q96JG6 964 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 CABS1Q96KC9 395 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 C5orf34Q96MH7 638 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 EPS8L2Q9H6S3 715 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 SYNPO2LQ9H987 977 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 ZNF160Q9HCG1 818 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 AGPAT4Q9NRZ5 378 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 GALPQ9UBC7 116 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 ZNF282Q9UDV7 671 aaPredicted RBP11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 C3orf18Q9UK00 162 aa11.01□□□□□ -0.65
HMGCS1-204ENST00000507293 H0YGG7 62 aa11□□□□□ -0.65
HMGCS1-204ENST00000507293 MYO1CO00159 1063 aa11□□□□□ -0.65
HMGCS1-204ENST00000507293 E2F3O00716 465 aa11□□□□□ -0.65
HMGCS1-204ENST00000507293 FFAR3O14843 346 aa11□□□□□ -0.65
HMGCS1-204ENST00000507293 PFDN6O15212 129 aa11□□□□□ -0.65
HMGCS1-204ENST00000507293 GPR42O15529 346 aa11□□□□□ -0.65
HMGCS1-204ENST00000507293 CEP104O60308 925 aa11□□□□□ -0.65
HMGCS1-204ENST00000507293 PKMP14618 531 aaKnown RBP11□□□□□ -0.65
HMGCS1-204ENST00000507293 ACPPP15309 386 aa11□□□□□ -0.65
HMGCS1-204ENST00000507293 RPA3P35244 121 aaPredicted RBP11□□□□□ -0.65
HMGCS1-204ENST00000507293 TSFMP43897 325 aaKnown RBP11□□□□□ -0.65
HMGCS1-204ENST00000507293 ARF3P61204 181 aaPredicted RBP11□□□□□ -0.65
HMGCS1-204ENST00000507293 CDK16Q00536 496 aa11□□□□□ -0.65
HMGCS1-204ENST00000507293 CDC16Q13042 620 aa11□□□□□ -0.65
HMGCS1-204ENST00000507293 MFAP5Q13361 173 aa11□□□□□ -0.65
HMGCS1-204ENST00000507293 KCNJ11Q14654 390 aa11□□□□□ -0.65
HMGCS1-204ENST00000507293 ZNF169Q14929 603 aaPredicted RBP11□□□□□ -0.65
HMGCS1-204ENST00000507293 TRIP13Q15645 432 aaPredicted RBP11□□□□□ -0.65
HMGCS1-204ENST00000507293 PRTGQ2VWP7 1150 aa11□□□□□ -0.65
HMGCS1-204ENST00000507293 KLHL38Q2WGJ6 581 aa11□□□□□ -0.65
HMGCS1-204ENST00000507293 ANKRD20A4Q4UJ75 823 aa11□□□□□ -0.65
HMGCS1-204ENST00000507293 VWA2Q5GFL6 755 aa11□□□□□ -0.65
HMGCS1-204ENST00000507293 ZNF787Q6DD87 383 aa11□□□□□ -0.65
HMGCS1-204ENST00000507293 FBXO42Q6P3S6 717 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms