RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 ZNF677Q86XU0 584 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 C2orf73Q8N5S3 287 aaPredicted RBP6.81□□□□□ -1.32
VCAN-207ENST00000507162 OR52N2Q8NGI0 321 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 METTL21AQ8WXB1 218 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 TFGQ92734 400 aaPredicted RBP6.81□□□□□ -1.32
VCAN-207ENST00000507162 SELENOSQ9BQE4 189 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 CDCP1Q9H5V8 836 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 ROS1P08922 2347 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 A0A087X1B8 175 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 LOC102723996A0A087X1L8 192 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 A0A1W2PPR1 153 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 KLRC4-KLRK1H3BQV0 150 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 BUD23O43709 281 aaKnown RBP6.8□□□□□ -1.32
VCAN-207ENST00000507162 NME2P1O60361 137 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 NME2P22392 152 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 SHMT2P34897 504 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 SERPINB6P35237 376 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 PPP1R2P41236 205 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 PRKCIP41743 596 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 ZNF135P52742 658 aaPredicted RBP6.8□□□□□ -1.32
VCAN-207ENST00000507162 EFNA3P52797 238 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 C8orf34Q49A92 452 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 ZC3H12BQ5HYM0 836 aaKnown RBP6.8□□□□□ -1.32
VCAN-207ENST00000507162 CCDC122Q5T0U0 273 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 ZNF468Q5VIY5 522 aaPredicted RBP6.8□□□□□ -1.32
VCAN-207ENST00000507162 KLHDC7AQ5VTJ3 777 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 ALG1LQ6GMV1 187 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 H3F3CQ6NXT2 135 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 PRMT9Q6P2P2 845 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 ZNF449Q6P9G9 518 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 FIGLAQ6QHK4 219 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 POLNQ7Z5Q5 900 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 PHF13Q86YI8 300 aaPredicted RBP6.8□□□□□ -1.32
VCAN-207ENST00000507162 SLC13A5Q86YT5 568 aaPredicted RBP6.8□□□□□ -1.32
VCAN-207ENST00000507162 LRRC49Q8IUZ0 686 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 SULF2Q8IWU5 870 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 CPAMD8Q8IZJ3 1885 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 POGLUT1Q8NBL1 392 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 DDHD1Q8NEL9 900 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 OR5AR1Q8NGP9 310 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 FLVCR1-AS1Q8TAF5 88 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 HSPH1Q92598 858 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 RNASE6Q93091 150 aaKnown RBP6.8□□□□□ -1.32
VCAN-207ENST00000507162 ZNF775Q96BV0 537 aaPredicted RBP6.8□□□□□ -1.32
VCAN-207ENST00000507162 CSPG4P5Q96PW8 444 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 KCNK17Q96T54 332 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 NPAS2Q99743 824 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 PIP5K1AQ99755 562 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 THAP2Q9H0W7 228 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 MAN1B1Q9UKM7 699 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 ACAD8Q9UKU7 415 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 PLAGL1Q9UM63 463 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 SPO11Q9Y5K1 396 aa6.8□□□□□ -1.32
VCAN-207ENST00000507162 SNRNP200O75643 2136 aaKnown RBP6.79□□□□□ -1.32
VCAN-207ENST00000507162 IGLV3-12A0A075B6K2 115 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 GLYATL1P3A0A0U1RQE8 302 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 A0A1W2PQ72 361 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 TCRBV5S1A1TA0A578 114 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 KLHL33A6NCF5 533 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 FIGNL2A6NMB9 653 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 PES1O00541 588 aaKnown RBP6.79□□□□□ -1.32
VCAN-207ENST00000507162 NDC80O14777 642 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 SLC16A5O15375 505 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 PEX1O43933 1283 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 HRGP04196 525 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 C8orf89P0DMQ9 161 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 BMP5P22003 454 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 CHRNA4P43681 627 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 CYB561P49447 251 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 GSCP56915 257 aaPredicted RBP6.79□□□□□ -1.32
VCAN-207ENST00000507162 BOP1Q14137 746 aaKnown RBP6.79□□□□□ -1.32
VCAN-207ENST00000507162 CLEC16AQ2KHT3 1053 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 MFSD4BQ5TF39 518 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 PLAG1Q6DJT9 500 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 RTL6Q6ICC9 239 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 TMEM205Q6UW68 189 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 CPEB2Q7Z5Q1 589 aaKnown RBP6.79□□□□□ -1.32
VCAN-207ENST00000507162 SLC5A8Q8N695 610 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 LMNTD1Q8N9Z9 388 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 HM13Q8TCT9 377 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 ZNF398Q8TD17 642 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 MAML1Q92585 1016 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 WNT2BQ93097 391 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 KIAA1191Q96A73 305 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 DCUN1D1Q96GG9 259 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 CCL19Q99731 98 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 STK33Q9BYT3 514 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 OR52A5Q9H2C5 316 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 ASF1AQ9Y294 204 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 FAM215AQ9Y5M1 114 aa6.79□□□□□ -1.32
VCAN-207ENST00000507162 LOC105369274A0A096LPK9 316 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 LOC102723532A0A0G2JNH3 316 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 A0A0J9YVX5 310 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 RNF223E7ERA6 249 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 F8VZ95 297 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 QSOX1O00391 747 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 BIN1O00499 593 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 DDX3XO00571 662 aaKnown RBP eCLIP6.78□□□□□ -1.32
VCAN-207ENST00000507162 DVL2O14641 736 aa6.78□□□□□ -1.32
VCAN-207ENST00000507162 CASKO14936 926 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms