RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 NDC1Q9BTX1 674 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 SLC25A23Q9BV35 468 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 SLC26A1Q9H2B4 701 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 SLC6A20Q9NP91 592 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 ACSS2Q9NR19 701 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 FAM114A2Q9NRY5 505 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 CUTCQ9NTM9 273 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 C20orf96Q9NUD7 363 aaPredicted RBP8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 IFT80Q9P2H3 777 aaPredicted RBP8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 ANKMY1Q9P2S6 941 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 ASIC3Q9UHC3 531 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 TSR3Q9UJK0 312 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 PCDHGB7Q9Y5F8 929 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 MAD1L1Q9Y6D9 718 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 HEATR5BQ9P2D3 2071 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 HECTD1Q9ULT8 2610 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 LOC105369274A0A096LPK9 316 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 LOC102723532A0A0G2JNH3 316 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 E7ENX8 843 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 TP73O15350 636 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 BANF1O75531 89 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 MED26O95402 600 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 SLC16A8O95907 504 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 ALBP02768 609 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 GABRB3P28472 473 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 CMPK1P30085 196 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 HSD17B2P37059 387 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 FOLR3P41439 243 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 CCL11P51671 97 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 PGDP52209 483 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 PNLIPRP1P54315 467 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 RRADP55042 308 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 FOXL2P58012 376 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 TAP2Q03519 686 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 CUL1Q13616 776 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 GRM7Q14831 915 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 SLC9A5Q14940 896 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 PRTGQ2VWP7 1150 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 SPANXN3Q5MJ09 141 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 MLIPQ5VWP3 458 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 FRMPD2BQ6IN97 320 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 ZNF425Q6IV72 752 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 FBXO42Q6P3S6 717 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 SUSD1Q6UWL2 747 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 TTLL10Q6ZVT0 673 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 SYDE1Q6ZW31 735 aaPredicted RBP8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 OVCH1Q7RTY7 1134 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 PPP1R32Q7Z5V6 425 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 PCGF5Q86SE9 256 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 GALNT7Q86SF2 657 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 IGDCC3Q8IVU1 814 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 LRRC56Q8IYG6 542 aaPredicted RBP8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 OR4N4Q8N0Y3 316 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 TEX19Q8NA77 164 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 FDCSPQ8NFU4 85 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 ZNF480Q8WV37 535 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 INPP5DQ92835 1189 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 NACC2Q96BF6 587 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 PTERQ96BW5 349 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 PKP4Q99569 1192 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 SPSB2Q99619 263 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 ZFYVE21Q9BQ24 234 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 PLCD4Q9BRC7 762 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 NAT9Q9BTE0 207 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 DPH7Q9BTV6 452 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 NUDT9Q9BW91 350 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 ACAT2Q9BWD1 397 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 CCDC68Q9H2F9 335 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 WDR54Q9H977 334 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 SYNPO2LQ9H987 977 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 IARS2Q9NSE4 1012 aaKnown RBP8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 IRAK4Q9NWZ3 460 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 NDOR1Q9UHB4 597 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 GPN3Q9UHW5 284 aaPredicted RBP8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 PYCARDQ9ULZ3 195 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 PTRH2Q9Y3E5 179 aaKnown RBP8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 NUP210LQ5VU65 1888 aa8.68□□□□□ -1.02
PDLIM5-209ENST00000506632 A0A0J9YVX5 310 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 VSTM2BA6NLU5 285 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 ZNF839A8K0R7 811 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 SMAPO00193 183 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 VPS26AO75436 327 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 SORBS2O94875 1100 aaKnown RBP8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 IGHEP01854 428 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 ERVK-10P10266 1014 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 ALAS2P22557 587 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 IMPA1P29218 277 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 OTX2P32243 289 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 CD97P48960 835 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 EMP3P54852 163 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 SOX8P57073 446 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 VSX2P58304 361 aaPredicted RBP8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 GNG11P61952 73 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 RELAQ04206 551 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 PRDX1Q06830 199 aaKnown RBP8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 CBLBQ13191 982 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 MORF4L2Q15014 288 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 NKG7Q16617 165 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 FAM214AQ32MH5 1076 aa8.67□□□□□ -1.02
PDLIM5-209ENST00000506632 BBS9Q3SYG4 887 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms