RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 ATG10Q9H0Y0 220 aa17.12■□□□□ 0.33
SMN1-204ENST00000506163 ACTR5Q9H9F9 607 aaPredicted RBP17.12■□□□□ 0.33
SMN1-204ENST00000506163 L2HGDHQ9H9P8 463 aa17.12■□□□□ 0.33
SMN1-204ENST00000506163 ABCF3Q9NUQ8 709 aa17.12■□□□□ 0.33
SMN1-204ENST00000506163 SH2B3Q9UQQ2 575 aa17.12■□□□□ 0.33
SMN1-204ENST00000506163 LOC105369274A0A096LPK9 316 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 LOC102723532A0A0G2JNH3 316 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 HMX2A2RU54 273 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 MEN1O00255 615 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 PHGDHO43175 533 aaKnown RBP17.11■□□□□ 0.33
SMN1-204ENST00000506163 CAPN1P07384 714 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 RHOXF2BP0C7M4 288 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 CCNYL3P0C7X3 344 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 STX2P32856 288 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 RPA3P35244 121 aaPredicted RBP17.11■□□□□ 0.33
SMN1-204ENST00000506163 DLSTP36957 453 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 PPP1R3AQ16821 1122 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 ATP1A1-AS1Q5TC04 95 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 GRTP1Q5TC63 336 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 FRMPD2BQ6IN97 320 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 ZNF425Q6IV72 752 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 AGTRAPQ6RW13 159 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 DSELQ8IZU8 1212 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 OR4N4Q8N0Y3 316 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 TTC9Q92623 222 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 FMO2Q99518 471 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 RHOXF2Q9BQY4 288 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 CHST8Q9H2A9 424 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 CDC42EP4Q9H3Q1 356 aaKnown RBP17.11■□□□□ 0.33
SMN1-204ENST00000506163 STARD5Q9NSY2 213 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 INTS7Q9NVH2 962 aaKnown RBP17.11■□□□□ 0.33
SMN1-204ENST00000506163 CUEDC1Q9NWM3 386 aaPredicted RBP17.11■□□□□ 0.33
SMN1-204ENST00000506163 MTRF1LQ9UGC7 380 aaKnown RBP17.11■□□□□ 0.33
SMN1-204ENST00000506163 NFU1Q9UMS0 254 aa17.11■□□□□ 0.33
SMN1-204ENST00000506163 ATRXP46100 2492 aa17.1■□□□□ 0.33
SMN1-204ENST00000506163 NPEPPSL1A6NEC2 478 aa17.1■□□□□ 0.33
SMN1-204ENST00000506163 MT-ND3P03897 115 aa17.1■□□□□ 0.33
SMN1-204ENST00000506163 TCN2P20062 427 aa17.1■□□□□ 0.33
SMN1-204ENST00000506163 CMPK1P30085 196 aa17.1■□□□□ 0.33
SMN1-204ENST00000506163 NAE1Q13564 534 aa17.1■□□□□ 0.33
SMN1-204ENST00000506163 USP10Q14694 798 aaKnown RBP17.1■□□□□ 0.33
SMN1-204ENST00000506163 ZKSCAN8Q15776 578 aaPredicted RBP17.1■□□□□ 0.33
SMN1-204ENST00000506163 PTCHD3Q3KNS1 767 aa17.1■□□□□ 0.33
SMN1-204ENST00000506163 FAM69BQ5VUD6 431 aa17.1■□□□□ 0.33
SMN1-204ENST00000506163 PAQR7Q86WK9 346 aa17.1■□□□□ 0.33
SMN1-204ENST00000506163 NKAPQ8N5F7 415 aaKnown RBP17.1■□□□□ 0.33
SMN1-204ENST00000506163 MRRFQ96E11 262 aaKnown RBP17.1■□□□□ 0.33
SMN1-204ENST00000506163 PLCD4Q9BRC7 762 aa17.1■□□□□ 0.33
SMN1-204ENST00000506163 FUT8Q9BYC5 575 aa17.1■□□□□ 0.33
SMN1-204ENST00000506163 POPDC3Q9HBV1 291 aa17.1■□□□□ 0.33
SMN1-204ENST00000506163 GPAMQ9HCL2 828 aa17.1■□□□□ 0.33
SMN1-204ENST00000506163 MRPS30Q9NP92 439 aaKnown RBP17.1■□□□□ 0.33
SMN1-204ENST00000506163 TXNDC16Q9P2K2 825 aa17.1■□□□□ 0.33
SMN1-204ENST00000506163 MDC1Q14676 2089 aaKnown RBP17.1■□□□□ 0.33
SMN1-204ENST00000506163 A0A0J9YVX5 310 aa17.09■□□□□ 0.33
SMN1-204ENST00000506163 ZSCAN9O15535 394 aaPredicted RBP17.09■□□□□ 0.33
SMN1-204ENST00000506163 ACSL3O95573 720 aa17.09■□□□□ 0.33
SMN1-204ENST00000506163 SPRP35270 261 aaPredicted RBP17.09■□□□□ 0.33
SMN1-204ENST00000506163 TBPL1P62380 186 aa17.09■□□□□ 0.33
SMN1-204ENST00000506163 NFKB2Q00653 900 aa17.09■□□□□ 0.33
SMN1-204ENST00000506163 DNASE1L3Q13609 305 aa17.09■□□□□ 0.33
SMN1-204ENST00000506163 RNF44Q7L0R7 432 aa17.09■□□□□ 0.33
SMN1-204ENST00000506163 CMC1Q7Z7K0 106 aa17.09■□□□□ 0.33
SMN1-204ENST00000506163 GPR135Q8IZ08 494 aa17.09■□□□□ 0.33
SMN1-204ENST00000506163 DTWD1Q8N5C7 304 aa17.09■□□□□ 0.33
SMN1-204ENST00000506163 STARD8Q92502 1023 aa17.09■□□□□ 0.33
SMN1-204ENST00000506163 N4BP2L2Q92802 583 aaPredicted RBP17.09■□□□□ 0.33
SMN1-204ENST00000506163 MR1Q95460 341 aa17.09■□□□□ 0.33
SMN1-204ENST00000506163 KIAA1143Q96AT1 154 aaPredicted RBP17.09■□□□□ 0.33
SMN1-204ENST00000506163 CLIP3Q96DZ5 547 aa17.09■□□□□ 0.33
SMN1-204ENST00000506163 SGPP1Q9BX95 441 aa17.09■□□□□ 0.33
SMN1-204ENST00000506163 ENAMQ9NRM1 1142 aa17.09■□□□□ 0.33
SMN1-204ENST00000506163 ARL15Q9NXU5 204 aa17.09■□□□□ 0.33
SMN1-204ENST00000506163 UTP6Q9NYH9 597 aaKnown RBP17.09■□□□□ 0.33
SMN1-204ENST00000506163 DHCR7Q9UBM7 475 aaKnown RBP17.09■□□□□ 0.33
SMN1-204ENST00000506163 CCDC88CQ9P219 2028 aa17.09■□□□□ 0.33
SMN1-204ENST00000506163 ZNF839A8K0R7 811 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 H7BY64 318 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 MED26O95402 600 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 GUCA1CO95843 209 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 FURINP09958 794 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 FAM153BP0C7A2 387 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 ITGAXP20702 1163 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 CSRP3P50461 194 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 RPS18P62269 152 aaKnown RBP17.08■□□□□ 0.32
SMN1-204ENST00000506163 DLG1Q12959 904 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 TSNQ15631 228 aaKnown RBP17.08■□□□□ 0.32
SMN1-204ENST00000506163 LINC00303Q3SY05 128 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 FAM153CQ494X1 144 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 SOWAHCQ53LP3 525 aaPredicted RBP17.08■□□□□ 0.32
SMN1-204ENST00000506163 ZC3H12BQ5HYM0 836 aaKnown RBP17.08■□□□□ 0.32
SMN1-204ENST00000506163 C1orf189Q5VU69 101 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 RHBDD2Q6NTF9 364 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 FAM198BQ6UWH4 519 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 TMEM151BQ8IW70 566 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 ANKRD7Q92527 254 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 PYCR2Q96C36 320 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 UBXN10Q96LJ8 280 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 PRAP1Q96NZ9 151 aa17.08■□□□□ 0.32
SMN1-204ENST00000506163 GBP5Q96PP8 586 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms