RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 PRR23BQ6ZRT6 265 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 FAM83HQ6ZRV2 1179 aaPredicted RBP7.8□□□□□ -1.16
COL4A5-208ENST00000505728 RIPOR1Q6ZS17 1223 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 HPS6Q86YV9 775 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 LRRC56Q8IYG6 542 aaPredicted RBP7.8□□□□□ -1.16
COL4A5-208ENST00000505728 SYTL1Q8IYJ3 562 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 MINDY1Q8N5J2 469 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 FLCNQ8NFG4 579 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 WDR20Q8TBZ3 569 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 PROKR1Q8TCW9 393 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 REPS1Q96D71 796 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 MED8Q96G25 268 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 OR4K3Q96R72 315 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 ZBTB18Q99592 522 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 HAUS8Q9BT25 410 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 EFCAB11Q9BUY7 163 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 C1orf50Q9BV19 199 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 ACPTQ9BZG2 426 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 PCBD2Q9H0N5 130 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 IRF2BPLQ9H1B7 796 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 SLC6A17Q9H1V8 727 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 EHD1Q9H4M9 534 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 BRF2Q9HAW0 419 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 FARSBQ9NSD9 589 aaKnown RBP7.8□□□□□ -1.16
COL4A5-208ENST00000505728 USP36Q9P275 1121 aaKnown RBP7.8□□□□□ -1.16
COL4A5-208ENST00000505728 TMEM181Q9P2C4 612 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 MAP10Q9P2G4 905 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 STX18Q9P2W9 335 aaKnown RBP7.8□□□□□ -1.16
COL4A5-208ENST00000505728 DUSP12Q9UNI6 340 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 POMPQ9Y244 141 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 TSC22D4Q9Y3Q8 395 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 OR1A2Q9Y585 309 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 OTOGLQ3ZCN5 2332 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 BPTFQ12830 3046 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 NUP214P35658 2090 aaPredicted RBP7.8□□□□□ -1.16
COL4A5-208ENST00000505728 CEP250Q9BV73 2442 aa7.8□□□□□ -1.16
COL4A5-208ENST00000505728 C15orf38-AP3S2A0A0A6YYH1 394 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 TCRBV21S2A2A0A5A6 115 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 KANSL1LA0AUZ9 987 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 CCDC154A6NI56 674 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 PRR19A6NJB7 356 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 C10orf142B7Z368 130 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 FPGTO14772 594 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 TNFRSF10CO14798 259 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 ANKRD28O15084 1053 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 PDE5AO76074 875 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 IGLV3-19P01714 112 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 SLC35G4P0C7Q5 338 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 C1GALT1C1LP0DN25 315 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 ERGP11308 486 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 NPPBP16860 134 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 AMD1P17707 334 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 GABRG2P18507 467 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 CAPN3P20807 821 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 IDSP22304 550 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 HNRNPA2B1P22626 353 aaKnown RBP7.79□□□□□ -1.16
COL4A5-208ENST00000505728 JAK1P23458 1154 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 IL12AP29459 219 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 NUDT1P36639 197 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 TPMTP51580 245 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 CCR5P51681 352 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 CLCNKAP51800 687 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 NEK2P51955 445 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 DGKEP52429 567 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 CLNS1AP54105 237 aaKnown RBP7.79□□□□□ -1.16
COL4A5-208ENST00000505728 NME5P56597 212 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 CLDN8P56748 225 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 TBPL1P62380 186 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 YPEL5P62699 121 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 PPP2CBP62714 309 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 AP2B1P63010 937 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 RPL38P63173 70 aaKnown RBP7.79□□□□□ -1.16
COL4A5-208ENST00000505728 PPP2CAP67775 309 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 CTBSQ01459 385 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 CEACAM7Q14002 265 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 RCAN2Q14206 197 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 LRRC32Q14392 662 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 TLR1Q15399 786 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 CCDC6Q16204 474 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 CYP2A13Q16696 494 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 USP39Q53GS9 565 aaKnown RBP7.79□□□□□ -1.16
COL4A5-208ENST00000505728 PAGE2BQ5JRK9 111 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 SAMD4BQ5PRF9 694 aaKnown RBP7.79□□□□□ -1.16
COL4A5-208ENST00000505728 ATG9BQ674R7 924 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 MED27Q6P2C8 311 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 NXPE4Q6UWF7 544 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 ZNF852Q6ZMS4 543 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 CHST15Q7LFX5 561 aaPredicted RBP7.79□□□□□ -1.16
COL4A5-208ENST00000505728 ARPINQ7Z6K5 226 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 FAM124AQ86V42 546 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 RETREG3Q86VR2 466 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 SIX5Q8N196 739 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 RAB42Q8N4Z0 105 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 DPP10Q8N608 796 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 OR5K2Q8NHB8 316 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 UBE2E3Q969T4 207 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 MTFMTQ96DP5 389 aaKnown RBP7.79□□□□□ -1.16
COL4A5-208ENST00000505728 FCRL1Q96LA6 429 aa7.79□□□□□ -1.16
COL4A5-208ENST00000505728 GPATCH1Q9BRR8 931 aaKnown RBP7.79□□□□□ -1.16
COL4A5-208ENST00000505728 DPY30Q9C005 99 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms