RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 CXorf40BQ96DE9 158 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 CCDC126Q96EE4 140 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 MAGEB10Q96LZ2 347 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 FOPNLQ96NB1 174 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 TXNDC16Q9P2K2 825 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 PCDHGA7Q9Y5G6 932 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 ANKRD12Q6UB98 2062 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 KRT87PA6NCN2 255 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 UBXN8O00124 270 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 ZW10O43264 779 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 RPLP0P05388 317 aaKnown RBP7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 MYF5P13349 255 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 ACPPP15309 386 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 RORAP35398 523 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 CSNK1G2P78368 415 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 YOD1Q5VVQ6 348 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 GRHL2Q6ISB3 625 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 FBXO42Q6P3S6 717 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 RBM44Q6ZP01 1051 aaKnown RBP7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 PLXDC1Q8IUK5 500 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 OR10G6Q8NH81 332 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 TCTN2Q96GX1 697 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 ATXN7L3BQ96GX2 97 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 MIPEPQ99797 713 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 NUDT22Q9BRQ3 303 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 NRSN2Q9GZP1 204 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 ASCL3Q9NQ33 180 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 SLC17A7Q9P2U7 560 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 TRPS1Q9UHF7 1281 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 TMEM184BQ9Y519 407 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 TNPO3Q9Y5L0 923 aaKnown RBP7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 TNRC6AQ8NDV7 1962 aaKnown RBP7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 IGHV5-51A0A0C4DH38 117 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 TRBC2A0A5B9 178 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 GIPC1O14908 333 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 H2AFYO75367 372 aaKnown RBP7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 MT-ND3P03897 115 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 RPA3P35244 121 aaPredicted RBP7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 CDC16Q13042 620 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 N4BP2L1Q5TBK1 243 aaPredicted RBP7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 LIPJQ5W064 366 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 HOMEZQ8IX15 550 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 DEFB124Q8NES8 71 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 AGAP11Q8TF27 550 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 CAPS2Q9BXY5 557 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 ZNF717Q9BY31 904 aaPredicted RBP7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 SLC6A16Q9GZN6 736 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 ALG9Q9H6U8 611 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 ZNF490Q9ULM2 529 aaPredicted RBP7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 STK38LQ9Y2H1 464 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 K7EPI3 171 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 ANXA5P08758 320 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 SERPINB1P30740 379 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 ALDH3A1P30838 453 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 AHRP35869 848 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 KLHL35Q6PF15 583 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 THOC6Q86W42 341 aaKnown RBP7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 MFSD9Q8NBP5 474 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 UHMK1Q8TAS1 419 aaKnown RBP7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 GATA6Q92908 595 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 ZDHHC12Q96GR4 267 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 CCDC74BQ96LY2 380 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 SORT1Q99523 831 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 STMN4Q9H169 189 aaPredicted RBP7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 VPS11Q9H270 941 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 STN1Q9H668 368 aaKnown RBP7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 PRDM9Q9NQV7 894 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 IMP3Q9NV31 184 aaKnown RBP7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 PCMTD2Q9NV79 361 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 AP1M2Q9Y6Q5 423 aa7.96□□□□□ -1.13
CDC42SE2-208ENST00000505065 FOXE1O00358 373 aaPredicted RBP7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 PRR35P0CG20 571 aa7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 SEPT7Q16181 437 aaKnown RBP7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 CEP85LQ5SZL2 805 aa7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 LIPMQ5VYY2 423 aa7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 OTUD6BQ8N6M0 293 aa7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 C19orf47Q8N9M1 422 aaKnown RBP7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 TMEM74Q96NL1 305 aa7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 QRFPRQ96P65 431 aa7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 MED4Q9NPJ6 270 aa7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 CFAP20Q9Y6A4 193 aaKnown RBP7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 ASPMQ8IZT6 3477 aa7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 OR6C74A6NCV1 312 aa7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 PCNX2A6NKB5 2137 aa7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 TMEM114B3SHH9 223 aa7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 MYZAPP0CAP1 466 aa7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 GFERP55789 205 aa7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 IL11RAQ14626 422 aa7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 C18orf21Q32NC0 220 aaPredicted RBP7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 NXPE4Q6UWF7 544 aa7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 VN1R4Q7Z5H5 301 aa7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 TCP10LQ8TDR4 215 aa7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 TRMOQ9BU70 441 aa7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 DRC3Q9H069 523 aa7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 SRMSQ9H3Y6 488 aa7.96□□□□□ -1.14
CDC42SE2-208ENST00000505065 IGLV3-12A0A075B6K2 115 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 RHPN2P1A8MT19 583 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 ZNF195O14628 629 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 CTSVO60911 334 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms