RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 SP9P0CG40 484 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 HGFP14210 728 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 ZNF16P17020 682 aaPredicted RBP10.03□□□□□ -0.8
TPM3-217ENST00000504663 XRCC1P18887 633 aaPredicted RBP10.03□□□□□ -0.8
TPM3-217ENST00000504663 AVPR2P30518 371 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 ZFP36L2P47974 494 aaKnown RBP10.03□□□□□ -0.8
TPM3-217ENST00000504663 AFF3P51826 1226 aaKnown RBP10.03□□□□□ -0.8
TPM3-217ENST00000504663 GPR18Q14330 331 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 KIF19Q2TAC6 998 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 ZNF528Q3MIS6 628 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 LACTB2Q53H82 288 aaPredicted RBP10.03□□□□□ -0.8
TPM3-217ENST00000504663 PRRT3Q5FWE3 981 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.03□□□□□ -0.8
TPM3-217ENST00000504663 LIPJQ5W064 366 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 OGFOD2Q6N063 350 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 SCIMPQ6UWF3 145 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 TRIM46Q7Z4K8 759 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 SYTL1Q8IYJ3 562 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 ADGRF3Q8IZF5 1079 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 KIRREL3Q8IZU9 778 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 RNF175Q8N4F7 328 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 C2orf73Q8N5S3 287 aaPredicted RBP10.03□□□□□ -0.8
TPM3-217ENST00000504663 CPSF7Q8N684 471 aaKnown RBP10.03□□□□□ -0.8
TPM3-217ENST00000504663 OR2A1Q8NGT9 310 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 PRR7Q8TB68 274 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 METTL6Q8TCB7 284 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 SLC5A11Q8WWX8 675 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 PTCD3Q96EY7 689 aaKnown RBP10.03□□□□□ -0.8
TPM3-217ENST00000504663 SLC45A3Q96JT2 553 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 MARK4Q96L34 752 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 EHD1Q9H4M9 534 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 AKTIPQ9H8T0 292 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 ERVMER34-1Q9H9K5 563 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 SLC40A1Q9NP59 571 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 SLC6A20Q9NP91 592 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 ARL8BQ9NVJ2 186 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 UCKL1Q9NWZ5 548 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 ARMCX1Q9P291 453 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 ZNF490Q9ULM2 529 aaPredicted RBP10.03□□□□□ -0.8
TPM3-217ENST00000504663 SLC12A4Q9UP95 1085 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 APOBEC2Q9Y235 224 aaKnown RBP10.03□□□□□ -0.8
TPM3-217ENST00000504663 SNX11Q9Y5W9 270 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 COPG1Q9Y678 874 aaKnown RBP10.03□□□□□ -0.8
TPM3-217ENST00000504663 ARID1BQ8NFD5 2236 aaPredicted RBP10.03□□□□□ -0.8
TPM3-217ENST00000504663 ADAMTS20P59510 1910 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 LAMA1P25391 3075 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 KIR2DS5A0A0G2JLQ3 304 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 A0A0G2JNG1 304 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 A0A1B0GTW7 788 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 H0YIV9 168 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 KIR2DS3K7RE56 304 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 LSM1O15116 133 aaKnown RBP10.02□□□□□ -0.81
TPM3-217ENST00000504663 ETHE1O95571 254 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 LINC00032P0C843 101 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 CDH1P12830 882 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 PRPH2P23942 346 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 HSD17B2P37059 387 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 HALP42357 657 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 DHPSP49366 369 aaPredicted RBP10.02□□□□□ -0.81
TPM3-217ENST00000504663 MRPL19P49406 292 aaKnown RBP10.02□□□□□ -0.81
TPM3-217ENST00000504663 BLKP51451 505 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 REEP5Q00765 189 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 BNIP1Q12981 228 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 ELOAQ14241 798 aaKnown RBP10.02□□□□□ -0.81
TPM3-217ENST00000504663 KIR2DS5Q14953 304 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 KIAA0040Q15053 153 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 ZRSR2Q15696 482 aaKnown RBP10.02□□□□□ -0.81
TPM3-217ENST00000504663 ATG9BQ674R7 924 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 OGFOD3Q6PK18 319 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 NXPE4Q6UWF7 544 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 YTHDF3Q7Z739 585 aaKnown RBP10.02□□□□□ -0.81
TPM3-217ENST00000504663 TMPRSS11BQ86T26 416 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 C11orf74Q86VG3 221 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 LAS2Q8IYD9 372 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 ZNF740Q8NDX6 193 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 ABHD11Q8NFV4 315 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 OR4K1Q8NGD4 311 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 SETD7Q8WTS6 366 aaKnown RBP10.02□□□□□ -0.81
TPM3-217ENST00000504663 SMPDL3AQ92484 453 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 C11orf24Q96F05 449 aaPredicted RBP10.02□□□□□ -0.81
TPM3-217ENST00000504663 FCRL1Q96LA6 429 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 CATSPER2Q96P56 530 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 ACPTQ9BZG2 426 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 ACTR8Q9H981 624 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 POT1Q9NUX5 634 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 EVA1BQ9NVM1 165 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 GEMIN8Q9NWZ8 242 aaKnown RBP10.02□□□□□ -0.81
TPM3-217ENST00000504663 ZSCAN32Q9NX65 697 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 CPNE7Q9UBL6 633 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 TAC3Q9UHF0 121 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 TSC22D4Q9Y3Q8 395 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 ANGPTL3Q9Y5C1 460 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 HEBP2Q9Y5Z4 205 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 MYO15AQ9UKN7 3530 aa10.02□□□□□ -0.81
TPM3-217ENST00000504663 TRBV23OR9-2A0A075B6M9 112 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 PIPSLA2A3N6 862 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 PABPN1LA6NDY0 278 aaKnown RBP10.01□□□□□ -0.81
TPM3-217ENST00000504663 OR5K4A6NMS3 321 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 PRR5-ARHGAP8B1AHC4 643 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 LMO7DNF2Z398 122 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms