RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 TBATAQ96M53 351 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 NELL2Q99435 816 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 BDH2Q9BUT1 245 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 TRIM8Q9BZR9 551 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 MMP27Q9H306 513 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 RNF6Q9Y252 685 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 CHD9Q3L8U1 2897 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 CCDC154A6NI56 674 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 HOXC11O43248 304 aaPredicted RBP6.19□□□□□ -1.42
COPB2-204ENST00000504295 CREG1O75629 220 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 SOAT2O75908 522 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 ABLIM3O94929 683 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 MSL3P1P0C860 447 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 MPC1LP0DKB6 136 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 NCK1P16333 377 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 NELFEP18615 380 aaKnown RBP6.19□□□□□ -1.42
COPB2-204ENST00000504295 CD86P42081 329 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 XCR1P46094 333 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 HTR3AP46098 478 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 GNPDA1P46926 289 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 VLDLRP98155 873 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 TRAF2Q12933 501 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 TSNQ15631 228 aaKnown RBP6.19□□□□□ -1.42
COPB2-204ENST00000504295 MAPRE1Q15691 268 aaKnown RBP6.19□□□□□ -1.42
COPB2-204ENST00000504295 TMEM240Q5SV17 173 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 LAMTOR1Q6IAA8 161 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 GLYATQ6IB77 296 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 CHRDL2Q6WN34 429 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 GDPD3Q7L5L3 318 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 GPR65Q8IYL9 337 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 HS3ST5Q8IZT8 346 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 OR4F6Q8NGB9 312 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 OR4M1Q8NGD0 313 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 HAVCR2Q8TDQ0 301 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 FRS2Q8WU20 508 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 SLC13A3Q8WWT9 602 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 SREK1Q8WXA9 508 aaKnown RBP6.19□□□□□ -1.42
COPB2-204ENST00000504295 RPL3LQ92901 407 aaKnown RBP6.19□□□□□ -1.42
COPB2-204ENST00000504295 CXorf40BQ96DE9 158 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 CELF6Q96J87 481 aaKnown RBP6.19□□□□□ -1.42
COPB2-204ENST00000504295 NSMCE2Q96MF7 247 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 KCTD14Q9BQ13 255 aaPredicted RBP6.19□□□□□ -1.42
COPB2-204ENST00000504295 APOL2Q9BQE5 337 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 CCDC32Q9BV29 185 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 MFRPQ9BY79 579 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.19□□□□□ -1.42
COPB2-204ENST00000504295 MIXL1Q9H2W2 232 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 ACOXLQ9NUZ1 547 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 NOX1Q9Y5S8 564 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 LYVE1Q9Y5Y7 322 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 PRSS21Q9Y6M0 314 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 TET1Q8NFU7 2136 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 KLKB1P03952 638 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 CSF2RAP15509 400 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 SDC1P18827 310 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 GALP22466 123 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 ACRV1P26436 265 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 PTBP1P26599 531 aaKnown RBP eCLIP6.19□□□□□ -1.421e-7■■■■■ 33.7
COPB2-204ENST00000504295 PCSK1P29120 753 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 PPP3CCP48454 512 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 TRPC1P48995 793 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 DUSP7Q16829 419 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 AASDHQ4L235 1098 aaPredicted RBP6.19□□□□□ -1.42
COPB2-204ENST00000504295 TIGD3Q6B0B8 471 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 SLC8B1Q6J4K2 584 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 TTC33Q6PID6 262 aaPredicted RBP6.19□□□□□ -1.42
COPB2-204ENST00000504295 HIPK1Q86Z02 1210 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 TCTE3Q8IZS6 198 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 PLA2G15Q8NCC3 412 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 HCAR2Q8TDS4 363 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 TRMT61AQ96FX7 289 aaKnown RBP6.19□□□□□ -1.42
COPB2-204ENST00000504295 YIPF2Q9BWQ6 316 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 SIK2Q9H0K1 926 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 BRF2Q9HAW0 419 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 DYRK4Q9NR20 520 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 RBM22Q9NW64 420 aaKnown RBP eCLIP6.19□□□□□ -1.42
COPB2-204ENST00000504295 NDUFB11Q9NX14 153 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 CACNG4Q9UBN1 327 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 RWDD3Q9Y3V2 267 aa6.19□□□□□ -1.42
COPB2-204ENST00000504295 ZBBXA8MT70 800 aa6.18□□□□□ -1.42
COPB2-204ENST00000504295 H0YIV9 168 aa6.18□□□□□ -1.42
COPB2-204ENST00000504295 CCNDBP1O95273 360 aa6.18□□□□□ -1.42
COPB2-204ENST00000504295 CSRP1P21291 193 aaKnown RBP6.18□□□□□ -1.42
COPB2-204ENST00000504295 CDH3P22223 829 aa6.18□□□□□ -1.42
COPB2-204ENST00000504295 SOX18P35713 384 aa6.18□□□□□ -1.42
COPB2-204ENST00000504295 ACVRL1P37023 503 aa6.18□□□□□ -1.42
COPB2-204ENST00000504295 ERFP50548 548 aa6.18□□□□□ -1.42
COPB2-204ENST00000504295 DHODHQ02127 395 aa6.18□□□□□ -1.42
COPB2-204ENST00000504295 ALDH6A1Q02252 535 aaKnown RBP6.18□□□□□ -1.42
COPB2-204ENST00000504295 SP140Q13342 867 aa6.18□□□□□ -1.42
COPB2-204ENST00000504295 NFATC2Q13469 925 aa6.18□□□□□ -1.42
COPB2-204ENST00000504295 ASAH1Q13510 395 aa6.18□□□□□ -1.42
COPB2-204ENST00000504295 SEC23BQ15437 767 aa6.18□□□□□ -1.42
COPB2-204ENST00000504295 RGS21Q2M5E4 152 aa6.18□□□□□ -1.42
COPB2-204ENST00000504295 GPRIN3Q6ZVF9 776 aa6.18□□□□□ -1.42
COPB2-204ENST00000504295 HS6ST3Q8IZP7 471 aa6.18□□□□□ -1.42
COPB2-204ENST00000504295 BCL7CQ8WUZ0 217 aaPredicted RBP6.18□□□□□ -1.42
COPB2-204ENST00000504295 EEF1AKMT1Q8WVE0 214 aa6.18□□□□□ -1.42
COPB2-204ENST00000504295 TAMM41Q96BW9 452 aa6.18□□□□□ -1.42
COPB2-204ENST00000504295 CASD1Q96PB1 797 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms