RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 C10orf107Q8IVU9 208 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 ARFGAP1Q8N6T3 406 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 CDYL2Q8N8U2 506 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 OR8J2Q8NGG1 315 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 ITFG1Q8TB96 612 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 CD99L2Q8TCZ2 262 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 AKAP1Q92667 903 aaKnown RBP eCLIP3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 KAT2AQ92830 837 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 COPS5Q92905 334 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 FBXO32Q969P5 355 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 DNAJC19Q96DA6 116 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 C19orf60Q96EN9 201 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 MBOAT7Q96N66 472 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 QKIQ96PU8 341 aaKnown RBP eCLIP3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 SLITRK1Q96PX8 696 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 TCF25Q9BQ70 676 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 TMEM246Q9BRR3 403 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 CHID1Q9BWS9 393 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 RIOX1Q9H6W3 641 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 GLOD4Q9HC38 313 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 BPIFA1Q9NP55 256 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 AMBNQ9NP70 447 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 ABCB9Q9NP78 766 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 XPNPEP3Q9NQH7 507 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 TMLHEQ9NVH6 421 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 BABAM2Q9NXR7 383 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 VPS28Q9UK41 221 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 GJD2Q9UKL4 321 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 BTBD3Q9Y2F9 522 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 MED16Q9Y2X0 877 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 LYVE1Q9Y5Y7 322 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 TCRBV9S1A1TA0A576 114 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 EFCAB10A6NFE3 127 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 CCDC154A6NI56 674 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 IQCF5A8MTL0 148 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 H3BNH8 94 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 ADAMTS3O15072 1205 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 EDF1O60869 148 aaKnown RBP3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 PCDH8O95206 1070 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 SEC24AO95486 1093 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 NDST3O95803 873 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 HCKP08631 526 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 GSTP1P09211 210 aaKnown RBP3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 RBP1P09455 135 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 HGFP14210 728 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 EFNA1P20827 205 aaPredicted RBP3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 CPN2P22792 545 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 THPOP40225 353 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 TNFSF9P41273 254 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 IL12RB1P42701 662 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 GRIA4P48058 902 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 CLCNKAP51800 687 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 GEMP55040 296 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 CARD18P57730 90 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 FMO1Q01740 532 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 LAMTOR4Q0VGL1 99 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 TRAF3Q13114 568 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 KLF1Q13351 362 aaPredicted RBP3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF177Q13360 481 aaPredicted RBP3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 MAMLD1Q13495 774 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 SERTAD2Q14140 314 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 TMEM132BQ14DG7 1078 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 PDK4Q16654 411 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 SDHAF4Q5VUM1 108 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 BROXQ5VW32 411 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 RBMS3Q6XE24 437 aaKnown RBP3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 MSANTD1Q6ZTZ1 278 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 TMEM26Q6ZUK4 368 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 RD3Q7Z3Z2 195 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 TRABD2AQ86V40 505 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 RASAL3Q86YV0 1011 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 SIAH1Q8IUQ4 282 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 ZCCHC9Q8N567 271 aaKnown RBP3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 ANKFN1Q8N957 763 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 AGBL5Q8NDL9 886 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 OR7A2PQ8NGA2 310 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 JOSD2Q8TAC2 188 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 ZFRQ96KR1 1074 aaKnown RBP3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 CSPG4P5Q96PW8 444 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 PCDHB18PQ96TA0 734 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 CGRRF1Q99675 332 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 NAT9Q9BTE0 207 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 TRIM62Q9BVG3 475 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 SARGQ9BW04 601 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 ADGRE3Q9BY15 652 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 TM6SF2Q9BZW4 377 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 GPR88Q9GZN0 384 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 ALX4Q9H161 411 aaPredicted RBP3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 UXTQ9UBK9 157 aaPredicted RBP3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 BTNL2Q9UIR0 455 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 OGDHLQ9ULD0 1010 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 HRH3Q9Y5N1 445 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 COPG1Q9Y678 874 aaKnown RBP3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 RTTNQ86VV8 2226 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 A0A0U1RQF3 1178 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 KPNA4O00629 521 aaPredicted RBP3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 SEC14L5O43304 696 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 PPIHO43447 177 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms