RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 FABP12A6NFH5 140 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 SCAMP1O15126 338 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 PRKD3O94806 890 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 GNALP38405 381 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 MAGEA11P43364 429 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 PITPNAQ00169 270 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 FCHO2Q0JRZ9 810 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 TXNDC8Q6A555 127 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 OR2T5Q6IEZ7 315 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 FRMD7Q6ZUT3 714 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 THOC6Q86W42 341 aaKnown RBP16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 LINC00471Q8N535 108 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 OR2T29Q8NH02 315 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 SIGLEC10Q96LC7 697 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 TCF7L1Q9HCS4 588 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 PRAMEF11O60813 436 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 ACRP10323 421 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 ACVR2AP27037 513 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 PGDP52209 483 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 SMYD5Q6GMV2 418 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 ARNTL2Q8WYA1 636 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 SMPDL3AQ92484 453 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 CCDC59Q9P031 241 aaKnown RBP16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 AHDC1Q5TGY3 1603 aaPredicted RBP16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 A0A1W2PP18 115 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 UPK3BL1B0FP48 263 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 UPK3BL2E5RIL1 263 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 ORC5O43913 435 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 CLDN7O95471 211 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 EBLN1P0CF75 366 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 ALPPL2P10696 532 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 HAPLN1P10915 354 aaPredicted RBP16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 GSK3BP49841 420 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 TNFAIP8L1Q8WVP5 186 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 EDDM13A0A1B0GTR0 161 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 RENP00797 406 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 CNPY1Q3B7I2 92 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 RNF19BQ6ZMZ0 732 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 CELF5Q8N6W0 485 aaKnown RBP16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 C2CD4AQ8NCU7 369 aaPredicted RBP16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 TMBIM1Q969X1 311 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 POPDC3Q9HBV1 291 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 INSL6Q9Y581 213 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 MATN2O00339 956 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 TLE2Q04725 743 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 PUDPQ08623 228 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 SP140Q13342 867 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 ZNF792Q3KQV3 632 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 KLHL36Q8N4N3 616 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 DCAF4L2Q8NA75 395 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 SNTG1Q9NSN8 517 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 RGPD2P0DJD1 1756 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 NPPAP01160 153 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 GSTT2BP0CG30 244 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 CD36P16671 472 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 DGKQP52824 942 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 MVKQ03426 396 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 SEMA3AQ14563 771 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 NPTX1Q15818 432 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 ADGRD2Q7Z7M1 963 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 CAND1Q86VP6 1230 aaKnown RBP16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 NRSN1Q8IZ57 195 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 NPLOC4Q8TAT6 608 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 TXNRD2Q9NNW7 524 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 PFDN2Q9UHV9 154 aa16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 SETD1AO15047 1707 aaKnown RBP16.12■□□□□ 0.17
PCDHA1-203ENST00000504120 A0A1W2PRG6 482 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 LOC730098B7Z3J9 87 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 NOS1APO75052 506 aaPredicted RBP16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 EPOP01588 193 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 CCKBRP32239 447 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 RAB15P59190 212 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 DNAJB13P59910 316 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 PCLAFQ15004 111 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 SLC2A7Q6PXP3 512 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 ENPP7Q6UWV6 458 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 Q6ZVU0 165 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 MMAAQ8IVH4 418 aaKnown RBP16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 PEBP4Q96S96 227 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 STOML2Q9UJZ1 356 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 PPM1HQ9ULR3 514 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 PIRO00625 290 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 MTX2O75431 263 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 SWI5Q1ZZU3 235 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 AMIGO3Q86WK7 504 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 NXPE1Q8N323 547 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 ZSWIM3Q96MP5 696 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 TUBGCP5Q96RT8 1024 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 FAM120CQ9NX05 1096 aaKnown RBP16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 CFL2Q9Y281 166 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 PCDHGB1Q9Y5G3 927 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 RGS20O76081 388 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 KLK1P06870 262 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 GALNT7Q86SF2 657 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 TMEM145Q8NBT3 493 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 CAMKVQ8NCB2 501 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 BHLHE41Q9C0J9 482 aaPredicted RBP16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 HCN3Q9P1Z3 774 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 GRIP1Q9Y3R0 1128 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 TLR4O00206 839 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms