RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 SPATA7Q9P0W8 599 aa15.54■□□□□ 0.08
SCLT1-204ENST00000503215 ZC3H7BQ9UGR2 993 aaKnown RBP15.54■□□□□ 0.08
SCLT1-204ENST00000503215 FBXL4Q9UKA2 621 aa15.54■□□□□ 0.08
SCLT1-204ENST00000503215 PCDHGB7Q9Y5F8 929 aa15.54■□□□□ 0.08
SCLT1-204ENST00000503215 MAD1L1Q9Y6D9 718 aa15.54■□□□□ 0.08
SCLT1-204ENST00000503215 NAV2Q8IVL1 2488 aa15.54■□□□□ 0.08
SCLT1-204ENST00000503215 MAST4O15021 2626 aa15.53■□□□□ 0.08
SCLT1-204ENST00000503215 USP9YO00507 2555 aaPredicted RBP15.53■□□□□ 0.08
SCLT1-204ENST00000503215 OR2A25A4D2G3 310 aa15.53■□□□□ 0.08
SCLT1-204ENST00000503215 E5RI56 91 aa15.53■□□□□ 0.08
SCLT1-204ENST00000503215 PGRMC1O00264 195 aaKnown RBP15.53■□□□□ 0.08
SCLT1-204ENST00000503215 SOCS6O14544 535 aa15.53■□□□□ 0.08
SCLT1-204ENST00000503215 DPM1O60762 260 aa15.53■□□□□ 0.08
SCLT1-204ENST00000503215 BANF1O75531 89 aa15.53■□□□□ 0.08
SCLT1-204ENST00000503215 USP1O94782 785 aa15.53■□□□□ 0.08
SCLT1-204ENST00000503215 HAUS5O94927 633 aa15.53■□□□□ 0.08
SCLT1-204ENST00000503215 FKBP9O95302 570 aa15.53■□□□□ 0.08
SCLT1-204ENST00000503215 PAMP19021 973 aa15.53■□□□□ 0.08
SCLT1-204ENST00000503215 THOC5Q13769 683 aaKnown RBP15.53■□□□□ 0.08
SCLT1-204ENST00000503215 MYBPC3Q14896 1274 aa15.53■□□□□ 0.08
SCLT1-204ENST00000503215 TCTE1Q5JU00 501 aa15.53■□□□□ 0.08
SCLT1-204ENST00000503215 VWA5B1Q5TIE3 1220 aa15.53■□□□□ 0.08
SCLT1-204ENST00000503215 KIRREL2Q6UWL6 708 aa15.53■□□□□ 0.08
SCLT1-204ENST00000503215 RNF44Q7L0R7 432 aa15.53■□□□□ 0.08
SCLT1-204ENST00000503215 FKBP10Q96AY3 582 aa15.53■□□□□ 0.08
SCLT1-204ENST00000503215 C10orf90Q96M02 699 aa15.53■□□□□ 0.08
SCLT1-204ENST00000503215 FER1L6-AS2Q96M78 137 aa15.53■□□□□ 0.08
SCLT1-204ENST00000503215 IP6K3Q96PC2 410 aa15.53■□□□□ 0.08
SCLT1-204ENST00000503215 XAB2Q9HCS7 855 aaKnown RBP15.53■□□□□ 0.08
SCLT1-204ENST00000503215 C20orf96Q9NUD7 363 aaPredicted RBP15.53■□□□□ 0.08
SCLT1-204ENST00000503215 INTS10Q9NVR2 710 aaKnown RBP15.53■□□□□ 0.08
SCLT1-204ENST00000503215 TRMT1Q9NXH9 659 aaKnown RBP15.53■□□□□ 0.08
SCLT1-204ENST00000503215 HS3ST3B1Q9Y662 390 aa15.53■□□□□ 0.08
SCLT1-204ENST00000503215 CNTRLQ7Z7A1 2325 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 PCM1Q15154 2024 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 MAGEB16A2A368 324 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 H0YGG7 62 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 AGPSO00116 658 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 FFAR3O14843 346 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 PFDN6O15212 129 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 GPR42O15529 346 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 SRPX2O60687 465 aaPredicted RBP15.52■□□□□ 0.08
SCLT1-204ENST00000503215 PHF2O75151 1096 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 SLC16A8O95907 504 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 MMP11P24347 488 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 ARF3P61204 181 aaPredicted RBP15.52■□□□□ 0.08
SCLT1-204ENST00000503215 SNRPNP63162 240 aaKnown RBP15.52■□□□□ 0.08
SCLT1-204ENST00000503215 TIAL1Q01085 375 aaKnown RBP eCLIP15.52■□□□□ 0.08
SCLT1-204ENST00000503215 PRTGQ2VWP7 1150 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 PRSS58Q8IYP2 241 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 RAB42Q8N4Z0 105 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 FAM26EQ8N5C1 309 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 EFCAB3Q8N7B9 438 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 TTC29Q8NA56 475 aaPredicted RBP15.52■□□□□ 0.08
SCLT1-204ENST00000503215 CLEC1AQ8NC01 280 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 MAGEC3Q8TD91 643 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 ZNF480Q8WV37 535 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 ASB11Q8WXH4 323 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 SMPDL3AQ92484 453 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 GPR21Q99679 349 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 PLCD4Q9BRC7 762 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 KCNF1Q9H3M0 494 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 ABCF3Q9NUQ8 709 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 TAC3Q9UHF0 121 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 CDC23Q9UJX2 597 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 FBXO5Q9UKT4 447 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 MRFAP1Q9Y605 127 aa15.52■□□□□ 0.08
SCLT1-204ENST00000503215 ESPL1Q14674 2120 aa15.52■□□□□ 0.07
SCLT1-204ENST00000503215 MDC1Q14676 2089 aaKnown RBP15.51■□□□□ 0.07
SCLT1-204ENST00000503215 DOCK10Q96BY6 2186 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 VSTM2BA6NLU5 285 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 VPS4BO75351 444 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 ALBP02768 609 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 CD63P08962 238 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 CMPK1P30085 196 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 PNLIPRP1P54315 467 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 MSS51Q4VC12 460 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 HSP90AA5PQ58FG0 334 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 RNASEH2BQ5TBB1 312 aaKnown RBP15.51■□□□□ 0.07
SCLT1-204ENST00000503215 YOD1Q5VVQ6 348 aaPredicted RBP15.51■□□□□ 0.07
SCLT1-204ENST00000503215 ARMC3Q5W041 872 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 PIWIL4Q7Z3Z4 852 aaKnown RBP15.51■□□□□ 0.07
SCLT1-204ENST00000503215 LAPTM4BQ86VI4 370 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 PAQR7Q86WK9 346 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 IGDCC3Q8IVU1 814 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 AMER2Q8N7J2 671 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 GALNT11Q8NCW6 608 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 CD200R1Q8TD46 325 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 ACTRT1Q8TDG2 376 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 INPP5DQ92835 1189 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 PNPLA2Q96AD5 504 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 ZFYVE21Q9BQ24 234 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 SLC26A1Q9H2B4 701 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 WDR54Q9H977 334 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 MRPS30Q9NP92 439 aaKnown RBP15.51■□□□□ 0.07
SCLT1-204ENST00000503215 ATP13A2Q9NQ11 1180 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 SLAMF7Q9NQ25 335 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 IARS2Q9NSE4 1012 aaKnown RBP15.51■□□□□ 0.07
SCLT1-204ENST00000503215 VPS4AQ9UN37 437 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 G3BP2Q9UN86 482 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms