RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 ZNF490Q9ULM2 529 aaPredicted RBP11.26□□□□□ -0.61
USP46-204ENST00000503060 OR2AG2A6NM03 316 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 QSOX1O00391 747 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 PRNPP04156 253 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 UQCRBP14927 111 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 SLC7A1P30825 629 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 HNMTP50135 292 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 RPL38P63173 70 aaKnown RBP11.26□□□□□ -0.61
USP46-204ENST00000503060 BNIP2Q12982 314 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 GRIN2CQ14957 1233 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 SGO1Q5FBB7 561 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 TICAM1Q8IUC6 712 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 RASGRP3Q8IV61 690 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 ICA1LQ8NDH6 482 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 GATA6Q92908 595 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 SLCO4A1Q96BD0 722 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 AP2M1Q96CW1 435 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 CHFRQ96EP1 664 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 P2RY13Q9BPV8 354 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 DEC1Q9P2X7 70 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 EIF3LQ9Y262 564 aaKnown RBP11.26□□□□□ -0.61
USP46-204ENST00000503060 MAGEA13PA6NCF6 341 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 OTOL1A6NHN0 477 aaPredicted RBP11.25□□□□□ -0.61
USP46-204ENST00000503060 STMND1H3BQB6 276 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 PSMD11O00231 422 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 SMNDC1O75940 238 aaKnown RBP eCLIP11.25□□□□□ -0.61
USP46-204ENST00000503060 SLCO2B1O94956 709 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 KRT6AP02538 564 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 DNTTP04053 509 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 KRT6BP04259 564 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 HLA-EP13747 358 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 JAK1P23458 1154 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 SOX6P35712 828 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 NRIP1P48552 1158 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 KRT6CP48668 564 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 AP1S2P56377 157 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 MRPS15P82914 257 aaKnown RBP11.25□□□□□ -0.61
USP46-204ENST00000503060 HMGCS1Q01581 520 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 MAD2L1Q13257 205 aaPredicted RBP11.25□□□□□ -0.61
USP46-204ENST00000503060 PIN1Q13526 163 aaPredicted RBP11.25□□□□□ -0.61
USP46-204ENST00000503060 DUSP6Q16828 381 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 FNDC3BQ53EP0 1204 aaKnown RBP11.25□□□□□ -0.61
USP46-204ENST00000503060 CEP78Q5JTW2 689 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 C9orf50Q5SZB4 431 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 TMEM154Q6P9G4 183 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 DPP10Q8N608 796 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 RASGEF1AQ8N9B8 481 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 GOLM1Q8NBJ4 401 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 VN1R2Q8NFZ6 395 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 OR2T34Q8NGX1 318 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 OR2T3Q8NH03 318 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 DNAJB14Q8TBM8 379 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 MCOLN3Q8TDD5 553 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 BTBD9Q96Q07 612 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 FAM83CQ9BQN1 747 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 EHD1Q9H4M9 534 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 SFXN1Q9H9B4 322 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 CERS4Q9HA82 394 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 ZNHIT2Q9UHR6 403 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 EDDM13A0A1B0GTR0 161 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 A6NHS1 94 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 HEPACAM2A8MVW5 462 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 MASP2O00187 686 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 WNT9AO14904 365 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 SPINT1O43278 529 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 RSL1D1O76021 490 aaKnown RBP11.25□□□□□ -0.61
USP46-204ENST00000503060 FSHRP23945 695 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 GNPDA1P46926 289 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 GSK3BP49841 420 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 METAP1P53582 386 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 CTSCP53634 463 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 ROR2Q01974 943 aaKnown RBP11.25□□□□□ -0.61
USP46-204ENST00000503060 IMPG1Q17R60 797 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 HNRNPA1L2Q32P51 320 aaKnown RBP11.25□□□□□ -0.61
USP46-204ENST00000503060 PTCHD3Q3KNS1 767 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 GGTA1PQ4G0N0 100 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 RABL3Q5HYI8 236 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 C9orf64Q5T6V5 341 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 SLC2A7Q6PXP3 512 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 KIAA2013Q8IYS2 634 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 RGL4Q8IZJ4 473 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 OR8D1Q8WZ84 308 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 FGF13Q92913 245 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 ARRDC3Q96B67 414 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 COQ10AQ96MF6 247 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 WRAP53Q9BUR4 548 aaKnown RBP11.25□□□□□ -0.61
USP46-204ENST00000503060 TRIM15Q9C019 465 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 LRTM1Q9HBL6 345 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 SLAMF8Q9P0V8 285 aa11.25□□□□□ -0.61
USP46-204ENST00000503060 KCNE1BA0A087WTH5 132 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 TMEM202A6NGA9 273 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 AQP12BA6NM10 295 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 ZNF839A8K0R7 811 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 ARNTLO00327 626 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 GSTM1P09488 218 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 UBTFL6P0CB48 400 aaPredicted RBP11.24□□□□□ -0.61
USP46-204ENST00000503060 ITGB7P26010 798 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 IDUAP35475 653 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 GRIA3P42263 894 aa11.24□□□□□ -0.61
USP46-204ENST00000503060 EEFSECP57772 596 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms