RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 KLHL18O94889 574 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 DIRAS1O95057 198 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 CHRM5P08912 532 aaPredicted RBP16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 CAPN3P20807 821 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 AP3S2P59780 193 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 RPS3AP61247 264 aaKnown RBP16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 TUSC3Q13454 348 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 ATAT1Q5SQI0 421 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 CNDP2Q96KP4 475 aaKnown RBP16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 TBC1D17Q9HA65 648 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 SDR39U1Q9NRG7 319 aaPredicted RBP16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 FLRT1Q9NZU1 646 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 IRAK3Q9Y616 596 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 OAS3Q9Y6K5 1087 aaKnown RBP16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 LTBP3Q9NS15 1303 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 TBC1D3BA6NDS4 549 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 TLR4O00206 839 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 MRPS14O60783 128 aaKnown RBP16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 CDRT1O95170 752 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 LAG3P18627 525 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 SPAM1P38567 509 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 LAPTM4AQ15012 233 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 GOLGA7Q7Z5G4 137 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 DNAJB7Q7Z6W7 309 aaPredicted RBP16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 OR10Q1Q8NGQ4 319 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 PPP1R13LQ8WUF5 828 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 ASPNQ9BXN1 380 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 C14orf119Q9NWQ9 140 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 AASSQ9UDR5 926 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 GGT1P19440 569 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 RABGGTBP53611 331 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 INHBCP55103 352 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 BTBD16Q32M84 506 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 CXorf57Q6NSI4 855 aaKnown RBP16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 PRSS48Q7RTY5 328 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 CLCN4P51793 760 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 PGGT1BP53609 377 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 SLC30A8Q8IWU4 369 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 ZNF431Q8TF32 576 aaPredicted RBP16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 ZFP90Q8TF47 636 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 FZD4Q9ULV1 537 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 MRPS17Q9Y2R5 130 aaKnown RBP16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 PCDHGA3Q9Y5H0 932 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 AQP9O43315 295 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 TARBP2Q15633 366 aaKnown RBP16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 OR4F3Q6IEY1 312 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 PHACTR4Q8IZ21 702 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 IL4I1Q96RQ9 567 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 TTYH2Q9BSA4 534 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 RNF11Q9Y3C5 154 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 NRP1O14786 923 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 TBL1XO60907 577 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 ERP29P30040 261 aaKnown RBP16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 SLC9A3P48764 834 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 RPP38P78345 283 aaKnown RBP16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 ST3GAL4Q11206 333 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 TMEM44Q2T9K0 475 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 ZDHHC20Q5W0Z9 365 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 ZFAND4Q86XD8 727 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 ACDQ96AP0 544 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 NSUN5Q96P11 429 aaKnown RBP16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 ATG10Q9H0Y0 220 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 RBPJLQ9UBG7 517 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 ZSCAN5BA6NJL1 495 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 OR5F1O95221 314 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 C8GP07360 202 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 SIPA1Q96FS4 1042 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 ZDHHC6Q9H6R6 413 aa16.79■□□□□ 0.28
HMGXB3-201ENST00000502717 FAM47E-STBD1D6RA91 191 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 REM1O75628 298 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 GGT5P36269 586 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 CLCNKBP51801 687 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 USP41Q3LFD5 358 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 ANKDD1AQ495B1 522 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 ZNF697Q5TEC3 545 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 CAPN13Q6MZZ7 669 aaPredicted RBP16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 TSPYL5Q86VY4 417 aaPredicted RBP16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 GEMIN6Q8WXD5 167 aaKnown RBP16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 ZNF778Q96MU6 729 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 FCRL4Q96PJ5 515 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 CNTN5O94779 1100 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 MATN1P21941 496 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 MAPK9P45984 424 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 HEPACAMQ14CZ8 416 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 SETMARQ53H47 684 aaPredicted RBP16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 KANK2Q63ZY3 851 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 TRAPPC5Q8IUR0 188 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 OR7D4Q8NG98 312 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 TMEM125Q96AQ2 219 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 SLC30A3Q99726 388 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 HAPLN2Q9GZV7 340 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 SMURF1Q9HCE7 757 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 POLR3BQ9NW08 1133 aaPredicted RBP16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 NFKBIL1Q9UBC1 381 aaPredicted RBP16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 ZNF24P17028 368 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 PNLIPRP1P54315 467 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 TAF10Q12962 218 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 MTAPQ13126 283 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms