RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 LTBP4Q8N2S1 1624 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 POLR1AO95602 1720 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-224ENST00000497488 CFAP65Q6ZU64 1925 aaKnown RBP5.82□□□□□ -1.48
BRCA1-224ENST00000497488 A0A1B0GUL7 405 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 TMEM189-UBE2V1I3L0A0 370 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 CASC3O15234 703 aaKnown RBP5.82□□□□□ -1.48
BRCA1-224ENST00000497488 SLC16A5O15375 505 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 CSDE1O75534 798 aaKnown RBP5.82□□□□□ -1.48
BRCA1-224ENST00000497488 RHBDL1O75783 438 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 CIB2O75838 187 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 NDUFA10O95299 355 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 TOP3BO95985 862 aaKnown RBP5.82□□□□□ -1.48
BRCA1-224ENST00000497488 POLR2MP0CAP2 368 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 ST6GAL1P15907 406 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 RPA2P15927 270 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 CDH3P22223 829 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 SLC9A3P48764 834 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 FMO5P49326 533 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 ALDH7A1P49419 539 aaKnown RBP5.82□□□□□ -1.48
BRCA1-224ENST00000497488 HSF2Q03933 536 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 FAM27E3Q08E93 113 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 LCP2Q13094 533 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 UBE2V1Q13404 147 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 CUL3Q13618 768 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 GK2Q14410 553 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-224ENST00000497488 PDIA5Q14554 519 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 DPYSL2Q16555 572 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 SYT16Q17RD7 645 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 C6orf10Q5SRN2 563 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 PMF1Q6P1K2 205 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 RBM44Q6ZP01 1051 aaKnown RBP5.82□□□□□ -1.48
BRCA1-224ENST00000497488 ZNF534Q76KX8 674 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 CYB5R4Q7L1T6 521 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 SGMS1Q86VZ5 419 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 GRAMD2AQ8IUY3 354 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 LAX1Q8IWV1 398 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 ARHGAP24Q8N264 748 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 LRRC43Q8N309 656 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 PDCL2Q8N4E4 241 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 ZNF276Q8N554 614 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 BCORP1Q8N888 145 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 ARL14EPQ8N8R7 260 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-224ENST00000497488 VANGL1Q8TAA9 524 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-224ENST00000497488 ZNF583Q96ND8 569 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 TAAR6Q96RI8 345 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 C17orf62Q9BQA9 187 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 BCL7BQ9BQE9 202 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 TRMOQ9BU70 441 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 NMNAT2Q9BZQ4 307 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 SNX25Q9H3E2 840 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 RAB9BQ9NP90 201 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 TCF7L2Q9NQB0 619 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 RPRD1BQ9NQG5 326 aaKnown RBP5.82□□□□□ -1.48
BRCA1-224ENST00000497488 IL20RAQ9UHF4 553 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 CNOT11Q9UKZ1 510 aaKnown RBP5.82□□□□□ -1.48
BRCA1-224ENST00000497488 DLGAP4Q9Y2H0 992 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 RPRD2Q5VT52 1461 aaKnown RBP5.82□□□□□ -1.48
BRCA1-224ENST00000497488 ARHGAP23Q9P227 1491 aa5.82□□□□□ -1.48
BRCA1-224ENST00000497488 ADGRB3O60242 1522 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 SLIT1O75093 1534 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 A0A0U1RRA0 63 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 TMEM129A0AVI4 362 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 NEMP2A6NFY4 417 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 ZNF716A6NP11 495 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 CYR61O00622 381 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 MED7O43513 233 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 CSO75390 466 aaKnown RBP5.81□□□□□ -1.48
BRCA1-224ENST00000497488 VPS26AO75436 327 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 SPDEFO95238 335 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 IL1BP01584 269 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 ASNSP08243 561 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 ZNF735P0CB33 412 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 MYL6BP14649 208 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 EPCAMP16422 314 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 NDUFB7P17568 137 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 DCTDP32321 178 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 DEKP35659 375 aaKnown RBP5.81□□□□□ -1.48
BRCA1-224ENST00000497488 OR3A1P47881 315 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 IRX4P78413 519 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 SLC34A1Q06495 639 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 MAD2L1Q13257 205 aaPredicted RBP5.81□□□□□ -1.48
BRCA1-224ENST00000497488 STIM1Q13586 685 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 TP53BP2Q13625 1128 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 HADHQ16836 314 aaKnown RBP5.81□□□□□ -1.48
BRCA1-224ENST00000497488 KIF19Q2TAC6 998 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 PCID2Q5JVF3 399 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 NCR3LG1Q68D85 454 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 CLEC2AQ6UVW9 174 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 TMPRSS11FQ6ZWK6 438 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 LUZP1Q86V48 1076 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 MISPQ8IVT2 679 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 SFTPA2Q8IWL1 248 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 PHC2Q8IXK0 858 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 LCORLQ8N3X6 602 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 CERS5Q8N5B7 392 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 SLC38A9Q8NBW4 561 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 STKLD1Q8NE28 680 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 OR4A16Q8NH70 328 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 MIPOL1Q8TD10 442 aa5.81□□□□□ -1.48
BRCA1-224ENST00000497488 FCGR1BQ92637 280 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms