RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 DNAJC15Q9Y5T4 150 aa8.12□□□□□ -1.11
USP54-215ENST00000497106 TMEM233B4DJY2 109 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 GPR39O43194 453 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 DRD3P35462 400 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 ARHGDIAP52565 204 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 TMTC4Q5T4D3 741 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 CPTPQ5TA50 214 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 TRIM40Q6P9F5 258 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 LAYNQ6UX15 382 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 Q6ZSR6 202 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 ZNF438Q7Z4V0 828 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 OR56A3Q8NH54 315 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 VPS33AQ96AX1 596 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 PPCDCQ96CD2 204 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 MARK4Q96L34 752 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 CAMK1GQ96NX5 476 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 NSUN5Q96P11 429 aaKnown RBP8.11□□□□□ -1.11
USP54-215ENST00000497106 HHIPQ96QV1 700 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 CDRT15Q96T59 188 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 FANCEQ9HB96 536 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 POT1Q9NUX5 634 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 TAC3Q9UHF0 121 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 SLC17A4Q9Y2C5 497 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 GREB1Q4ZG55 1949 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 OTOL1A6NHN0 477 aaPredicted RBP8.11□□□□□ -1.11
USP54-215ENST00000497106 RHPN2P1A8MT19 583 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 C2orf74A8MZ97 194 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 YKT6O15498 198 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 TSPAN12O95859 305 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 MTHFD1P11586 935 aaKnown RBP8.11□□□□□ -1.11
USP54-215ENST00000497106 ATXN3P54252 364 aaPredicted RBP8.11□□□□□ -1.11
USP54-215ENST00000497106 ADGRE1Q14246 886 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 ERICH5Q6P6B1 374 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 GK5Q6ZS86 529 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 DHDDSQ86SQ9 333 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 PROSER1Q86XN7 944 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 FBXW8Q8N3Y1 598 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 LIX1Q8N485 282 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 L3MBTL4Q8NA19 623 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 TP53I13Q8NBR0 393 aaPredicted RBP8.11□□□□□ -1.11
USP54-215ENST00000497106 CAMKVQ8NCB2 501 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 RGMAQ96B86 450 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 COX14Q96I36 57 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 SLC7A5P2Q9GIP4 190 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 MKRN2Q9H000 416 aaKnown RBP8.11□□□□□ -1.11
USP54-215ENST00000497106 OR6C2Q9NZP2 312 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 SH3BP4Q9P0V3 963 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 ANKMY1Q9P2S6 941 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 APOBEC3BQ9UH17 382 aaKnown RBP8.11□□□□□ -1.11
USP54-215ENST00000497106 ORC6Q9Y5N6 252 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 NYNRINQ9P2P1 1898 aaKnown RBP8.11□□□□□ -1.11
USP54-215ENST00000497106 DOCK4Q8N1I0 1966 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 GNGT2O14610 69 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 ANXA4P09525 319 aaPredicted RBP8.11□□□□□ -1.11
USP54-215ENST00000497106 MTHFD2P13995 350 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 ACPPP15309 386 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 GDF5P43026 501 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 CSRP3P50461 194 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 ELF3P78545 371 aaPredicted RBP8.11□□□□□ -1.11
USP54-215ENST00000497106 KIR2DS3Q14952 304 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 TMEM35AQ53FP2 167 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 MTX3Q5HYI7 312 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 C6orf136Q5SQH8 315 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 METRNLQ641Q3 311 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 DHFR2Q86XF0 187 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 ULK2Q8IYT8 1036 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 LSMEM2Q8N112 164 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 RBM15BQ8NDT2 890 aaKnown RBP8.11□□□□□ -1.11
USP54-215ENST00000497106 FAM162AQ96A26 154 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 PYCR2Q96C36 320 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 SLC38A3Q99624 504 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 ACSS2Q9NR19 701 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 MIA3Q5JRA6 1907 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 OR1F1O43749 312 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 ERN1O75460 977 aaKnown RBP8.11□□□□□ -1.11
USP54-215ENST00000497106 SOAT1P35610 550 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 IGFALSP35858 605 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 CHI3L1P36222 383 aaPredicted RBP8.11□□□□□ -1.11
USP54-215ENST00000497106 SSR2P43308 183 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 ERVPABLB-1P60509 514 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 B4GALNT1Q00973 533 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 COL19A1Q14993 1142 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 HEPACAMQ14CZ8 416 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 FBXO48Q5FWF7 155 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 CCNYL2Q5T2Q4 361 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 SLC30A9Q6PML9 568 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 CYHR1Q6ZMK1 362 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 IQCHQ86VS3 1027 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 DSELQ8IZU8 1212 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 CADM4Q8NFZ8 388 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 OR2L8Q8NGY9 312 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 MAELQ96JY0 434 aaKnown RBP8.11□□□□□ -1.11
USP54-215ENST00000497106 NSMCE3Q96MG7 304 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 CDK15Q96Q40 435 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 OR52E6Q96RD3 313 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 IL1RL2Q9HB29 575 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 FZD3Q9NPG1 666 aa8.11□□□□□ -1.11
USP54-215ENST00000497106 MTCL1Q9Y4B5 1905 aaKnown RBP8.11□□□□□ -1.11
USP54-215ENST00000497106 DYRK3O43781 588 aa8.1□□□□□ -1.11
USP54-215ENST00000497106 GABRG2P18507 467 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms