RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 DGKQP52824 942 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 NME5P56597 212 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 RPS8P62241 208 aaKnown RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 VEZF1Q14119 521 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 PCOLCEQ15113 449 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 MED22Q15528 200 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 NAB2Q15742 525 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 STXBP2Q15833 593 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 HNRNPA1L2Q32P51 320 aaKnown RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 USP41Q3LFD5 358 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 HIKESHIQ53FT3 197 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ESCO2Q56NI9 601 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 BEX5Q5H9J7 111 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 NOMO2Q5JPE7 1267 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 EARS2Q5JPH6 523 aaKnown RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 TOR2AQ5JU69 321 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 BEND3Q5T5X7 828 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ERMARDQ5T6L9 678 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ATF7IP2Q5U623 682 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 SULT1C3Q6IMI6 304 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 TCTN3Q6NUS6 607 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 CCDC137Q6PK04 289 aaKnown RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 PLEKHG7Q6ZR37 379 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 SNX20Q7Z614 316 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ANKRD46Q86W74 232 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 MISPQ8IVT2 679 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 SELENOHQ8IZQ5 122 aaKnown RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 SIX6OS1Q8N1H7 587 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 C1orf52Q8N6N3 182 aaKnown RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 FRMD1Q8N878 549 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 TDRD5Q8NAT2 981 aaKnown RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 OR2T34Q8NGX1 318 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 IL31RAQ8NI17 732 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 MITD1Q8WV92 249 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 PRPF31Q8WWY3 499 aaKnown RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 MAFIPQ8WZ33 124 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 TMEM143Q96AN5 459 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 C14orf79Q96F83 325 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 MRPL48Q96GC5 212 aaKnown RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF333Q96JL9 665 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 RPL10LQ96L21 214 aaKnown RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF48Q96MX3 618 aaPredicted RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 KCNK16Q96T55 309 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 SH2D3AQ9BRG2 576 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 FAM213AQ9BRX8 229 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 PIMREGQ9BSJ6 248 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 LRRC1Q9BTT6 524 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 KIFC1Q9BW19 673 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 RAB33BQ9H082 229 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 OR51M1Q9H341 326 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ST6GALNAC4Q9H4F1 302 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ZMAT4Q9H898 229 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ECT2Q9H8V3 914 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 MYOZ1Q9NP98 299 aaPredicted RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 XPNPEP1Q9NQW7 623 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 TUBG2Q9NRH3 451 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 SIRT3Q9NTG7 399 aaPredicted RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 RBAKQ9NYW8 714 aaPredicted RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 NCKIPSDQ9NZQ3 722 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ADAM22Q9P0K1 906 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ANKMY1Q9P2S6 941 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 TRPC4Q9UBN4 977 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 RAB23Q9ULC3 237 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 STARD10Q9Y365 291 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 CCL27Q9Y4X3 112 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 AP4B1Q9Y6B7 739 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 RNF215Q9Y6U7 377 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 BCL9O00512 1426 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 MROH7-TTC4A0A0A0MT08 1334 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 XDHP47989 1333 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 MYBBP1AQ9BQG0 1328 aaKnown RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ATP10AO60312 1499 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 A0A1B0GV90 55 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 A6NL46 340 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 SMIM23A6NLE4 172 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 OR2AT4A6NND4 320 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 WASHC1A8K0Z3 465 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 WASH3PC4AMC7 463 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 NPIPB8E9PQR5 432 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 FCHO1O14526 889 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 GSTA4O15217 222 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 HS6ST1O60243 411 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 JAK2O60674 1132 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ENTPD3O75355 529 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 MED6O75586 246 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 RPS6KA4O75676 772 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 PSMD10O75832 226 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 KAT7O95251 611 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 PGK1P00558 417 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 AMHP03971 560 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 A1BGP04217 495 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 SERPINA5P05154 406 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 RBP1P09455 135 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 SBK2P0C263 348 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 STAG3L2P0CL84 134 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 SMIM6P0DI80 62 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 MAGP20916 626 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 AGXTP21549 392 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ACVR2AP27037 513 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 EPHB2P29323 1055 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms