RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 EBPLQ9BY08 206 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 RBM38Q9H0Z9 239 aaKnown RBP12.65□□□□□ -0.38
GARNL3-220ENST00000496711 EPHX3Q9H6B9 360 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 CLK4Q9HAZ1 481 aaKnown RBP12.65□□□□□ -0.38
GARNL3-220ENST00000496711 LIMD1Q9UGP4 676 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 ADGRE2Q9UHX3 823 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 DMTF1Q9Y222 760 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 COQ6Q9Y2Z9 468 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 H0YIV9 168 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 PRMT3O60678 531 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 SOD1P00441 154 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 RETP07949 1114 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 HSD3B1P14060 373 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 ETS2P15036 469 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 PRPS1L1P21108 318 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 HSD3B2P26439 372 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 PTPN6P29350 595 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 KIR3DL1P43629 444 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 METAP1P53582 386 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 SH3BGRP55822 239 aaPredicted RBP12.65□□□□□ -0.38
GARNL3-220ENST00000496711 TUBA4AP68366 448 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 PCDH1Q08174 1060 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 MESP2Q0VG99 397 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 MTAPQ13126 283 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 HNRNPA1L2Q32P51 320 aaKnown RBP12.65□□□□□ -0.38
GARNL3-220ENST00000496711 PDE12Q6L8Q7 609 aaKnown RBP12.65□□□□□ -0.38
GARNL3-220ENST00000496711 ENPP6Q6UWR7 440 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 ZNF765Q7L2R6 523 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 GPR149Q86SP6 731 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 RBM23Q86U06 439 aaKnown RBP12.65□□□□□ -0.38
GARNL3-220ENST00000496711 ANKRD46Q86W74 232 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 DHRSXQ8N5I4 330 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 FAM86B1Q8N7N1 296 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 TMIEQ8NEW7 156 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 SPDYE1Q8NFV5 336 aaPredicted RBP12.65□□□□□ -0.38
GARNL3-220ENST00000496711 FOXJ1Q92949 421 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 TMBIM1Q969X1 311 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 ARRDC3Q96B67 414 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 AURKBQ96GD4 344 aaPredicted RBP12.65□□□□□ -0.38
GARNL3-220ENST00000496711 PKP4Q99569 1192 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 CARS2Q9HA77 564 aaKnown RBP12.65□□□□□ -0.38
GARNL3-220ENST00000496711 NTN4Q9HB63 628 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 HPS4Q9NQG7 708 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 SPATA6Q9NWH7 488 aaPredicted RBP12.65□□□□□ -0.38
GARNL3-220ENST00000496711 VPS29Q9UBQ0 182 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 FADS3Q9Y5Q0 445 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 H3BM21 787 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 UPK1AO00322 258 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 RFXANKO14593 260 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 NPC1O15118 1278 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 SLC16A8O95907 504 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 HLA-EP13747 358 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 MYOGP15173 224 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 CDKN2CP42773 168 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 MTHFRP42898 656 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 SLC6A11P48066 632 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 ROR2Q01974 943 aaKnown RBP12.64□□□□□ -0.39
GARNL3-220ENST00000496711 DDX39BQ13838 428 aaKnown RBP12.64□□□□□ -0.39
GARNL3-220ENST00000496711 ELAVL3Q14576 367 aaKnown RBP12.64□□□□□ -0.39
GARNL3-220ENST00000496711 EIF4HQ15056 248 aaKnown RBP12.64□□□□□ -0.39
GARNL3-220ENST00000496711 ZNF658BQ4V348 819 aaPredicted RBP12.64□□□□□ -0.39
GARNL3-220ENST00000496711 C9orf64Q5T6V5 341 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 THEMIS2Q5TEJ8 643 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 OR4F3Q6IEY1 312 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 TMEM214Q6NUQ4 689 aaKnown RBP12.64□□□□□ -0.39
GARNL3-220ENST00000496711 BORAQ6PGQ7 559 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 TTC33Q6PID6 262 aaPredicted RBP12.64□□□□□ -0.39
GARNL3-220ENST00000496711 FKBP9P1Q75LS8 142 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 NLRP8Q86W28 1048 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 TRIML2Q8N7C3 387 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 FBXO15Q8NCQ5 510 aaPredicted RBP12.64□□□□□ -0.39
GARNL3-220ENST00000496711 POP5Q969H6 163 aaKnown RBP12.64□□□□□ -0.39
GARNL3-220ENST00000496711 GFM2Q969S9 779 aaKnown RBP12.64□□□□□ -0.39
GARNL3-220ENST00000496711 PPP1R16AQ96I34 528 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 FBXL20Q96IG2 436 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 METTL2AQ96IZ6 378 aaKnown RBP12.64□□□□□ -0.39
GARNL3-220ENST00000496711 ZFYVE19Q96K21 471 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 EGLN2Q96KS0 407 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 OR4K3Q96R72 315 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 MTIF3Q9H2K0 278 aaKnown RBP12.64□□□□□ -0.39
GARNL3-220ENST00000496711 BRF2Q9HAW0 419 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 SGK2Q9HBY8 427 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 GPRC5BQ9NZH0 403 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 DEC1Q9P2X7 70 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 CIDEBQ9UHD4 219 aa12.64□□□□□ -0.39
GARNL3-220ENST00000496711 RUVBL1Q9Y265 456 aaKnown RBP12.64□□□□□ -0.39
GARNL3-220ENST00000496711 LAMA2P24043 3122 aaKnown RBP12.64□□□□□ -0.39
GARNL3-220ENST00000496711 VILLO15195 856 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 RECQL5O94762 991 aaPredicted RBP12.63□□□□□ -0.39
GARNL3-220ENST00000496711 B3GALT4O96024 378 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 GSNP06396 782 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 PCNAP12004 261 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 C6P13671 934 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 PDHA2P29803 388 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 GZMMP51124 257 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 ALDH3A2P51648 485 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 ARSFP54793 590 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 SRSF11Q05519 484 aaKnown RBP12.63□□□□□ -0.39
GARNL3-220ENST00000496711 ACSM2AQ08AH3 577 aa12.63□□□□□ -0.39
GARNL3-220ENST00000496711 ABHD18Q0P651 414 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms