RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 RBM44Q6ZP01 1051 aaKnown RBP20.97■□□□□ 0.95
C9orf3-222ENST00000496567 C17orf64Q86WR6 236 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 OR4K3Q96R72 315 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 C1QTNF3Q9BXJ4 246 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 PITPNM3Q9BZ71 974 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 MRPS30Q9NP92 439 aaKnown RBP20.97■□□□□ 0.95
C9orf3-222ENST00000496567 GPRC5BQ9NZH0 403 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 PDP2Q9P2J9 529 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 KLHL3Q9UH77 587 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 ANGPTL3Q9Y5C1 460 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 PCM1Q15154 2024 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 DMXL1Q9Y485 3027 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 GIPC1O14908 333 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 RASSF9O75901 435 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 EPB42P16452 691 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 SERPINB4P48594 390 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 PPP2R2AP63151 447 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 INSM1Q01101 510 aaPredicted RBP20.97■□□□□ 0.95
C9orf3-222ENST00000496567 CDC16Q13042 620 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 PDK4Q16654 411 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 ZNF678Q5SXM1 525 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 C10orf107Q8IVU9 208 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 SNX31Q8N9S9 440 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 L3HYPDHQ96EM0 354 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 MAP3K3Q99759 626 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 FAM53CQ9NYF3 392 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 TMEM9Q9P0T7 183 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 ASB1Q9Y576 335 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 CEP250Q9BV73 2442 aa20.96■□□□□ 0.95
C9orf3-222ENST00000496567 E2F3O00716 465 aa20.96■□□□□ 0.95
C9orf3-222ENST00000496567 BIRC5O15392 142 aa20.96■□□□□ 0.95
C9orf3-222ENST00000496567 TRIM13O60858 407 aa20.96■□□□□ 0.95
C9orf3-222ENST00000496567 KATNA1O75449 491 aa20.96■□□□□ 0.95
C9orf3-222ENST00000496567 BPGMP07738 259 aa20.96■□□□□ 0.95
C9orf3-222ENST00000496567 RPS17P08708 135 aaKnown RBP20.96■□□□□ 0.95
C9orf3-222ENST00000496567 DHRS4L1P0CG22 281 aa20.96■□□□□ 0.95
C9orf3-222ENST00000496567 GNAZP19086 355 aa20.96■□□□□ 0.95
C9orf3-222ENST00000496567 HRH2P25021 359 aa20.96■□□□□ 0.95
C9orf3-222ENST00000496567 ALDH3A1P30838 453 aa20.96■□□□□ 0.95
C9orf3-222ENST00000496567 CACHD1Q5VU97 1274 aa20.96■□□□□ 0.95
C9orf3-222ENST00000496567 DHRS13Q6UX07 377 aa20.96■□□□□ 0.95
C9orf3-222ENST00000496567 ZNF574Q6ZN55 896 aaPredicted RBP20.96■□□□□ 0.95
C9orf3-222ENST00000496567 TMPRSS9Q7Z410 1059 aa20.96■□□□□ 0.95
C9orf3-222ENST00000496567 PRSS42Q7Z5A4 293 aa20.96■□□□□ 0.95
C9orf3-222ENST00000496567 TEX9Q8N6V9 391 aa20.96■□□□□ 0.95
C9orf3-222ENST00000496567 PPP4R1Q8TF05 950 aa20.96■□□□□ 0.95
C9orf3-222ENST00000496567 TMEM74Q96NL1 305 aa20.96■□□□□ 0.95
C9orf3-222ENST00000496567 TMEM237Q96Q45 408 aa20.96■□□□□ 0.95
C9orf3-222ENST00000496567 SEMA6CQ9H3T2 930 aa20.96■□□□□ 0.95
C9orf3-222ENST00000496567 DLL3Q9NYJ7 618 aa20.96■□□□□ 0.95
C9orf3-222ENST00000496567 IGHV5-10-1A0A0J9YXX1 117 aa20.95■□□□□ 0.94
C9orf3-222ENST00000496567 LRRC14BA6NHZ5 514 aa20.95■□□□□ 0.94
C9orf3-222ENST00000496567 H3BQF6 201 aa20.95■□□□□ 0.94
C9orf3-222ENST00000496567 THRAP10827 490 aa20.95■□□□□ 0.94
C9orf3-222ENST00000496567 NR1D1P20393 614 aa20.95■□□□□ 0.94
C9orf3-222ENST00000496567 MPSTP25325 297 aa20.95■□□□□ 0.94
C9orf3-222ENST00000496567 TRA2AQ13595 282 aaKnown RBP eCLIP20.95■□□□□ 0.94
C9orf3-222ENST00000496567 GTF2H2Q13888 395 aa20.95■□□□□ 0.94
C9orf3-222ENST00000496567 SNAP47Q5SQN1 464 aa20.95■□□□□ 0.94
C9orf3-222ENST00000496567 KIAA1614Q5VZ46 1190 aa20.95■□□□□ 0.94
C9orf3-222ENST00000496567 GTF2H2CQ6P1K8 395 aa20.95■□□□□ 0.94
C9orf3-222ENST00000496567 TRIM73Q86UV7 250 aa20.95■□□□□ 0.94
C9orf3-222ENST00000496567 NUDCD3Q8IVD9 361 aa20.95■□□□□ 0.94
C9orf3-222ENST00000496567 SLITRK4Q8IW52 837 aa20.95■□□□□ 0.94
C9orf3-222ENST00000496567 SLC5A11Q8WWX8 675 aa20.95■□□□□ 0.94
C9orf3-222ENST00000496567 ZUFSPQ96AP4 578 aa20.95■□□□□ 0.94
C9orf3-222ENST00000496567 PAIP2Q9BPZ3 127 aaKnown RBP20.95■□□□□ 0.94
C9orf3-222ENST00000496567 MECRQ9BV79 373 aa20.95■□□□□ 0.94
C9orf3-222ENST00000496567 SEMA5BQ9P283 1151 aa20.95■□□□□ 0.94
C9orf3-222ENST00000496567 ANKMY1Q9P2S6 941 aa20.95■□□□□ 0.94
C9orf3-222ENST00000496567 PCTPQ9UKL6 214 aa20.95■□□□□ 0.94
C9orf3-222ENST00000496567 PIEZO1Q92508 2521 aa20.95■□□□□ 0.94
C9orf3-222ENST00000496567 TMX2-CTNND1H3BSU7 103 aa20.94■□□□□ 0.94
C9orf3-222ENST00000496567 CLGNO14967 610 aa20.94■□□□□ 0.94
C9orf3-222ENST00000496567 MAP3K7O43318 606 aa20.94■□□□□ 0.94
C9orf3-222ENST00000496567 KIF1CO43896 1103 aaKnown RBP20.94■□□□□ 0.94
C9orf3-222ENST00000496567 SUPT7LO94864 414 aa20.94■□□□□ 0.94
C9orf3-222ENST00000496567 ANKRD34CP0C6C1 535 aa20.94■□□□□ 0.94
C9orf3-222ENST00000496567 NAGLUP54802 743 aa20.94■□□□□ 0.94
C9orf3-222ENST00000496567 ZFP36L1Q07352 338 aaKnown RBP20.94■□□□□ 0.94
C9orf3-222ENST00000496567 CFAP157Q5JU67 520 aa20.94■□□□□ 0.94
C9orf3-222ENST00000496567 CDCP2Q5VXM1 449 aa20.94■□□□□ 0.94
C9orf3-222ENST00000496567 MTERF4Q7Z6M4 381 aaKnown RBP20.94■□□□□ 0.94
C9orf3-222ENST00000496567 KMT5CQ86Y97 462 aa20.94■□□□□ 0.94
C9orf3-222ENST00000496567 MGARPQ8TDB4 240 aa20.94■□□□□ 0.94
C9orf3-222ENST00000496567 NEIL2Q969S2 332 aa20.94■□□□□ 0.94
C9orf3-222ENST00000496567 PPM1MQ96MI6 270 aa20.94■□□□□ 0.94
C9orf3-222ENST00000496567 TRAPPC9Q96Q05 1148 aa20.94■□□□□ 0.94
C9orf3-222ENST00000496567 MLXIPLQ9NP71 852 aa20.94■□□□□ 0.94
C9orf3-222ENST00000496567 SNX7Q9UNH6 387 aa20.94■□□□□ 0.94
C9orf3-222ENST00000496567 KLK4Q9Y5K2 254 aa20.94■□□□□ 0.94
C9orf3-222ENST00000496567 DCDC2BA2VCK2 349 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 ZBTB11O95625 1053 aaPredicted RBP20.93■□□□□ 0.94
C9orf3-222ENST00000496567 GRIA3P42263 894 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 LSSP48449 732 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 INHBCP55103 352 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 UNC50Q53HI1 259 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 PHF19Q5T6S3 580 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 FIGLAQ6QHK4 219 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 GOLGA7Q7Z5G4 137 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms