RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 DCAF10Q5QP82 559 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 TXNRD3NBQ6F5E7 133 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 ALKBH5Q6P6C2 394 aaKnown RBP3.42□□□□□ -1.86
CLK1-214ENST00000496205 MSANTD1Q6ZTZ1 278 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 C11orf57Q6ZUT1 292 aaPredicted RBP3.42□□□□□ -1.86
CLK1-214ENST00000496205 FOXL2NBQ6ZUU3 175 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 ZNF611Q8N823 705 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 MAPKAPK5-AS1Q8N8E1 139 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 NAT8LQ8N9F0 302 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.42□□□□□ -1.86
CLK1-214ENST00000496205 NHLRC2Q8NBF2 726 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 SLC24A4Q8NFF2 622 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 DBF4BQ8NFT6 615 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 RDM1Q8NG50 284 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 OR2T12Q8NG77 320 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 OR10Q1Q8NGQ4 319 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 HSD17B8Q92506 261 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 SLC47A1Q96FL8 570 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 ERO1AQ96HE7 468 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 IGSF21Q96ID5 467 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 FAM71F1Q96KD3 344 aaPredicted RBP3.42□□□□□ -1.86
CLK1-214ENST00000496205 SGK494Q96LW2 274 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 MYADMQ96S97 322 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 PSD2Q9BQI7 771 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 RTP3Q9BQQ7 232 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 MLPHQ9BV36 600 aaPredicted RBP3.42□□□□□ -1.86
CLK1-214ENST00000496205 GTPBP2Q9BX10 602 aaKnown RBP3.42□□□□□ -1.86
CLK1-214ENST00000496205 OLFML3Q9NRN5 406 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 PHPT1Q9NRX4 125 aaPredicted RBP3.42□□□□□ -1.86
CLK1-214ENST00000496205 HPF1Q9NWY4 346 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 SNX7Q9UNH6 387 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 LIPT1Q9Y234 373 aa3.42□□□□□ -1.86
CLK1-214ENST00000496205 ABCC9O60706 1549 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 IGLV5-45A0A087WSX0 123 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 DUXAA6NLW8 204 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 RTCAO00442 366 aaKnown RBP3.41□□□□□ -1.86
CLK1-214ENST00000496205 NDC80O14777 642 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 CAPN9O14815 690 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 XPNPEP2O43895 674 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 RNASEH1O60930 286 aaKnown RBP3.41□□□□□ -1.86
CLK1-214ENST00000496205 FCGR3BO75015 233 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 PNPP00491 289 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 TSHBP01222 138 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 SAGP10523 405 aaPredicted RBP3.41□□□□□ -1.86
CLK1-214ENST00000496205 CASTP20810 708 aaKnown RBP3.41□□□□□ -1.86
CLK1-214ENST00000496205 CA4P22748 312 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 EEF1B2P24534 225 aaKnown RBP3.41□□□□□ -1.86
CLK1-214ENST00000496205 SLC6A6P31641 620 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 DCTP40126 519 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 MNDAP41218 407 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 FMO5P49326 533 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 RGS7P49802 495 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 RPS18P62269 152 aaKnown RBP3.41□□□□□ -1.86
CLK1-214ENST00000496205 PITX1P78337 314 aaPredicted RBP3.41□□□□□ -1.86
CLK1-214ENST00000496205 DLK1P80370 383 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 RASGEF1BQ0VAM2 473 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 AP1B1Q10567 949 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 TNK1Q13470 666 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 TAF7Q15545 349 aaPredicted RBP3.41□□□□□ -1.86
CLK1-214ENST00000496205 PTGISQ16647 500 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 SMU1Q2TAY7 513 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 CYB5D1Q6P9G0 228 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 MOXD1Q6UVY6 613 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 BTNL8Q6UX41 500 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 GBP6Q6ZN66 633 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 ANKRD33Q7Z3H0 272 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 SPATA21Q7Z572 469 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 SMIM29Q86T20 159 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 PLD3Q8IV08 490 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 SYCP3Q8IZU3 236 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 NAGSQ8N159 534 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 ZNF619Q8N2I2 560 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 ATAD1Q8NBU5 361 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 KCNH5Q8NCM2 988 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 OR1J1Q8NGS3 322 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 C9orf43Q8TAL5 461 aaPredicted RBP3.41□□□□□ -1.86
CLK1-214ENST00000496205 TAF4BQ92750 862 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 RIT1Q92963 219 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 ATP6V0A1Q93050 837 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 EGFL8Q99944 293 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 LRRC1Q9BTT6 524 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 FUT8Q9BYC5 575 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 LAT2Q9GZY6 243 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 ABCG4Q9H172 646 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 MINDY3Q9H8M7 445 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 CNIH4Q9P003 139 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 SEPT10Q9P0V9 454 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 CACNG4Q9UBN1 327 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 LEF1Q9UJU2 399 aaPredicted RBP3.41□□□□□ -1.86
CLK1-214ENST00000496205 MTF2Q9Y483 593 aaPredicted RBP3.41□□□□□ -1.86
CLK1-214ENST00000496205 JRKLQ9Y4A0 524 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 RIPK3Q9Y572 518 aa3.41□□□□□ -1.86
CLK1-214ENST00000496205 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 A0A1W2PS18 150 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 SLC30A4O14863 429 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 PPIP5K2O43314 1243 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 PRKNO60260 465 aaPredicted RBP3.4□□□□□ -1.87
CLK1-214ENST00000496205 DDHD2O94830 711 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 BAG3O95817 575 aa3.4□□□□□ -1.87
CLK1-214ENST00000496205 FRMD6-AS1P0C7T7 363 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms