RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 GDF5P43026 501 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 BDKRB1P46663 353 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 SLC6A11P48066 632 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 ATXN3P54252 364 aaPredicted RBP6.72□□□□□ -1.33
USP39-219ENST00000496047 UFM1P61960 85 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 CREB5Q02930 508 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 ACSM2AQ08AH3 577 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 ABRQ12979 859 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 GRM2Q14416 872 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 CST6Q15828 149 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 C18orf21Q32NC0 220 aaPredicted RBP6.72□□□□□ -1.33
USP39-219ENST00000496047 TBCELQ5QJ74 424 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 C6orf10Q5SRN2 563 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 THEMIS2Q5TEJ8 643 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 ACSM2BQ68CK6 577 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 TANGO2Q6ICL3 276 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 KIAA1161Q6NSJ0 714 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 MED27Q6P2C8 311 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 TLDC1Q6P9B6 456 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 ADAMTSL4Q6UY14 1074 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 MBOAT1Q6ZNC8 495 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 Q6ZSR9 355 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 RFLNAQ6ZTI6 216 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 FKBP9P1Q75LS8 142 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 GPR180Q86V85 440 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 PDSS2Q86YH6 399 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 SYT12Q8IV01 421 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 DCUN1D3Q8IWE4 304 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 RGL4Q8IZJ4 473 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 KRT78Q8N1N4 520 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 RASGEF1AQ8N9B8 481 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 PROKR1Q8TCW9 393 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 GANCQ8TET4 914 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 SNX19Q92543 992 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 RAD51AP1Q96B01 352 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 RSPRY1Q96DX4 576 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 ITCHQ96J02 903 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 GBP5Q96PP8 586 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 CGREF1Q99674 301 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 GPATCH1Q9BRR8 931 aaKnown RBP6.72□□□□□ -1.33
USP39-219ENST00000496047 CENPKQ9BS16 269 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 HAUS8Q9BT25 410 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 C9orf16Q9BUW7 83 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 RAB11FIP5Q9BXF6 653 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 UGT2B28Q9BY64 529 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 OR2AG1Q9H205 316 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 RMI1Q9H9A7 625 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 COPS7BQ9H9Q2 264 aaPredicted RBP6.72□□□□□ -1.33
USP39-219ENST00000496047 SGK2Q9HBY8 427 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 CCDC177Q9NQR7 707 aaPredicted RBP6.72□□□□□ -1.33
USP39-219ENST00000496047 SPATA7Q9P0W8 599 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 STOX2Q9P2F5 926 aaPredicted RBP6.72□□□□□ -1.33
USP39-219ENST00000496047 PDP2Q9P2J9 529 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 CD300AQ9UGN4 299 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 ADGRE2Q9UHX3 823 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 ANAPC2Q9UJX6 822 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 PACSIN3Q9UKS6 424 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 CNOT11Q9UKZ1 510 aaKnown RBP6.72□□□□□ -1.33
USP39-219ENST00000496047 SCML1Q9UN30 329 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 CORO2BQ9UQ03 480 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 AURKCQ9UQB9 309 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 RUVBL1Q9Y265 456 aaKnown RBP6.72□□□□□ -1.33
USP39-219ENST00000496047 SLC22A14Q9Y267 594 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 ITM2BQ9Y287 266 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 NCKAP1Q9Y2A7 1128 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 COQ6Q9Y2Z9 468 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 ASB1Q9Y576 335 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 FADS3Q9Y5Q0 445 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 STON1Q9Y6Q2 735 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 MUC6Q6W4X9 2439 aa6.72□□□□□ -1.33
USP39-219ENST00000496047 ARHGEF33A8MVX0 844 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 TMEM229AB2RXF0 380 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 H0YIV9 168 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 NME4O00746 187 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 ARPC2O15144 300 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 KMOO15229 486 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 SORBS2O94875 1100 aaKnown RBP6.71□□□□□ -1.34
USP39-219ENST00000496047 DKK1O94907 266 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 C1orf105O95561 183 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 PCCBP05166 539 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 PGRP06401 933 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 SLC35G4P0C7Q5 338 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 PCNAP12004 261 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 PRPS1L1P21108 318 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 IGFBP4P22692 258 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 PPIBP23284 216 aaKnown RBP6.71□□□□□ -1.34
USP39-219ENST00000496047 SLC6A2P23975 617 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 FCARP24071 287 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 PEX2P28328 305 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 SERPINB1P30740 379 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 CA5AP35218 305 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 OPRD1P41143 372 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 P2RY2P41231 377 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 PREPP48147 710 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 GSK3BP49841 420 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 HNRNPFP52597 415 aaKnown RBP6.71□□□□□ -1.34
USP39-219ENST00000496047 CTSCP53634 463 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 SH3BGRP55822 239 aaPredicted RBP6.71□□□□□ -1.34
USP39-219ENST00000496047 POLE2P56282 527 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 CLDN8P56748 225 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms