RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 TMX4Q9H1E5 349 aaPredicted RBP3.28□□□□□ -1.88
SRRM1-219ENST00000495561 DBNDD1Q9H9R9 158 aa3.28□□□□□ -1.88
SRRM1-219ENST00000495561 HYPKQ9NX55 129 aa3.28□□□□□ -1.88
SRRM1-219ENST00000495561 POLLQ9UGP5 575 aa3.28□□□□□ -1.88
SRRM1-219ENST00000495561 ABT1Q9ULW3 272 aaKnown RBP3.28□□□□□ -1.88
SRRM1-219ENST00000495561 EXO1Q9UQ84 846 aaKnown RBP3.28□□□□□ -1.88
SRRM1-219ENST00000495561 PPP1R3CQ9UQK1 317 aa3.28□□□□□ -1.88
SRRM1-219ENST00000495561 LRRFIP2Q9Y608 721 aaKnown RBP3.28□□□□□ -1.88
SRRM1-219ENST00000495561 ARFGEF1Q9Y6D6 1849 aa3.28□□□□□ -1.88
SRRM1-219ENST00000495561 HCFC1P51610 2035 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 COL4A1P02462 1669 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 PI4KAP2A4QPH2 592 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 SRRM5B3KS81 715 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 TPD52L2O43399 206 aaKnown RBP3.27□□□□□ -1.89
SRRM1-219ENST00000495561 PRKRAO75569 313 aaKnown RBP3.27□□□□□ -1.89
SRRM1-219ENST00000495561 IGKV5-2P06315 115 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 CA4P22748 312 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 PPM1FP49593 454 aaPredicted RBP3.27□□□□□ -1.89
SRRM1-219ENST00000495561 LBX1P52954 281 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 RPS8P62241 208 aaKnown RBP3.27□□□□□ -1.89
SRRM1-219ENST00000495561 PRKCZQ05513 592 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 CALCOCO2Q13137 446 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 DEFB115Q30KQ5 88 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 HSP90AB3PQ58FF7 597 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 FAM9BQ8IZU0 186 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 CPSF7Q8N684 471 aaKnown RBP3.27□□□□□ -1.89
SRRM1-219ENST00000495561 MAPKAPK5-AS1Q8N8E1 139 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 PI4KAP1Q8N8J0 262 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 PERPQ96FX8 193 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 MXD3Q9BW11 206 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 PAIP1Q9H074 479 aaKnown RBP3.27□□□□□ -1.89
SRRM1-219ENST00000495561 A4GALTQ9NPC4 353 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 ARHGAP26Q9UNA1 814 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 VIRMAQ69YN4 1812 aaKnown RBP3.27□□□□□ -1.89
SRRM1-219ENST00000495561 BCORQ6W2J9 1755 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 KDM3BQ7LBC6 1761 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 TIAM2Q8IVF5 1701 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 RIC1Q4ADV7 1423 aa3.27□□□□□ -1.89
SRRM1-219ENST00000495561 CNTNAP1P78357 1384 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 IBTKQ9P2D0 1353 aaPredicted RBP3.26□□□□□ -1.89
SRRM1-219ENST00000495561 DLEC1Q9Y238 1755 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 E9PI62 339 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 OGG1O15527 345 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 ECE2O60344 883 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 EIF3JO75822 258 aaKnown RBP3.26□□□□□ -1.89
SRRM1-219ENST00000495561 UFL1O94874 794 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 CELF2O95319 508 aaKnown RBP3.26□□□□□ -1.89
SRRM1-219ENST00000495561 PCCAP05165 728 aaPredicted RBP3.26□□□□□ -1.89
SRRM1-219ENST00000495561 PYGLP06737 847 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 HOXB7P09629 217 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 TUBP50607 506 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 B3GALT5-AS1P59052 145 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 CALD1Q05682 793 aaKnown RBP3.26□□□□□ -1.89
SRRM1-219ENST00000495561 ZRSR2Q15696 482 aaKnown RBP3.26□□□□□ -1.89
SRRM1-219ENST00000495561 TWISTNBQ3B726 338 aaPredicted RBP3.26□□□□□ -1.89
SRRM1-219ENST00000495561 RNF212Q495C1 297 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 KLHL26Q53HC5 615 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 CCDC30Q5VVM6 783 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 USP50Q70EL3 339 aaPredicted RBP3.26□□□□□ -1.89
SRRM1-219ENST00000495561 GALNT5Q7Z7M9 940 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 TBC1D1Q86TI0 1168 aaPredicted RBP3.26□□□□□ -1.89
SRRM1-219ENST00000495561 ZNF354CQ86Y25 554 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 HJURPQ8NCD3 748 aaPredicted RBP3.26□□□□□ -1.89
SRRM1-219ENST00000495561 TBC1D16Q8TBP0 767 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 MIPOL1Q8TD10 442 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 MORC4Q8TE76 937 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 ZKSCAN4Q969J2 545 aaPredicted RBP3.26□□□□□ -1.89
SRRM1-219ENST00000495561 CAPNS2Q96L46 248 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 PRICKLE1Q96MT3 831 aaPredicted RBP3.26□□□□□ -1.89
SRRM1-219ENST00000495561 NUDCD1Q96RS6 583 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 HGH1Q9BTY7 390 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 ABHD6Q9BV23 337 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 AGXT2Q9BYV1 514 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 CWC25Q9NXE8 425 aaPredicted RBP3.26□□□□□ -1.89
SRRM1-219ENST00000495561 TUBE1Q9UJT0 475 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 WDR90Q96KV7 1748 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 DLG5Q8TDM6 1919 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 SBF1O95248 1867 aa3.26□□□□□ -1.89
SRRM1-219ENST00000495561 RTL9Q8NET4 1388 aa3.25□□□□□ -1.89
SRRM1-219ENST00000495561 FANCIQ9NVI1 1328 aa3.25□□□□□ -1.89
SRRM1-219ENST00000495561 LTBP1Q14766 1721 aa3.25□□□□□ -1.89
SRRM1-219ENST00000495561 CACNA1SQ13698 1873 aa3.25□□□□□ -1.89
SRRM1-219ENST00000495561 FER1L6Q2WGJ9 1857 aa3.25□□□□□ -1.89
SRRM1-219ENST00000495561 ELOVL7A1L3X0 281 aa3.25□□□□□ -1.89
SRRM1-219ENST00000495561 DDX58O95786 925 aaKnown RBP3.25□□□□□ -1.89
SRRM1-219ENST00000495561 CYP2A7P20853 494 aa3.25□□□□□ -1.89
SRRM1-219ENST00000495561 CA6P23280 308 aa3.25□□□□□ -1.89
SRRM1-219ENST00000495561 LEPRP48357 1165 aaKnown RBP3.25□□□□□ -1.89
SRRM1-219ENST00000495561 GALCP54803 685 aa3.25□□□□□ -1.89
SRRM1-219ENST00000495561 PAX9P55771 341 aa3.25□□□□□ -1.89
SRRM1-219ENST00000495561 NIPAL4Q0D2K0 466 aa3.25□□□□□ -1.89
SRRM1-219ENST00000495561 LY6DQ14210 128 aa3.25□□□□□ -1.89
SRRM1-219ENST00000495561 TNIP1Q15025 636 aa3.25□□□□□ -1.89
SRRM1-219ENST00000495561 CCDC152Q4G0S7 254 aa3.25□□□□□ -1.89
SRRM1-219ENST00000495561 TMEM198Q66K66 360 aa3.25□□□□□ -1.89
SRRM1-219ENST00000495561 MOB2Q70IA6 237 aa3.25□□□□□ -1.89
SRRM1-219ENST00000495561 HEATR4Q86WZ0 1026 aa3.25□□□□□ -1.89
SRRM1-219ENST00000495561 ESX1Q8N693 406 aa3.25□□□□□ -1.89
SRRM1-219ENST00000495561 CCDC191Q8NCU4 936 aa3.25□□□□□ -1.89
SRRM1-219ENST00000495561 PUS3Q9BZE2 481 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms