RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 RPRD1AQ96P16 312 aaPredicted RBP6.42□□□□□ -1.38
VIM-207ENST00000495528 SNX18Q96RF0 628 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 CALN1Q9BXU9 219 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 ABCG4Q9H172 646 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 SAP30LQ9HAJ7 183 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 ASCL3Q9NQ33 180 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 NECTIN3Q9NQS3 549 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 TAS2R14Q9NYV8 317 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 NLGN3Q9NZ94 848 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 COX16Q9P0S2 106 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 SLC12A6Q9UHW9 1150 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 SLC25A13Q9UJS0 675 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 VANGL2Q9ULK5 521 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 SATB2Q9UPW6 733 aa6.42□□□□□ -1.38
VIM-207ENST00000495528 MGAQ8IWI9 3026 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 NEMP2A6NFY4 417 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 EIF3CLB5ME19 914 aaKnown RBP6.41□□□□□ -1.38
VIM-207ENST00000495528 KPNA3O00505 521 aaPredicted RBP6.41□□□□□ -1.38
VIM-207ENST00000495528 SCAMP1O15126 338 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 CASC3O15234 703 aaKnown RBP6.41□□□□□ -1.38
VIM-207ENST00000495528 SMAD6O43541 496 aaKnown RBP6.41□□□□□ -1.38
VIM-207ENST00000495528 SNAP91O60641 907 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 PPFIA2O75334 1257 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 GCATO75600 419 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 CNTN5O94779 1100 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 PAK4O96013 591 aaPredicted RBP6.41□□□□□ -1.38
VIM-207ENST00000495528 ALPPL2P10696 532 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 AKT2P31751 481 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 CCR1P32246 355 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 CHRNA3P32297 505 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 DUSP3P51452 185 aaPredicted RBP6.41□□□□□ -1.38
VIM-207ENST00000495528 PROK1P58294 105 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 SLC18A3Q16572 532 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 ISXQ2M1V0 245 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 ALFQ53S48 1182 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 C2CD6Q53TS8 623 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 AWAT1Q58HT5 328 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 PRAMEF17Q5VTA0 474 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 KIAA1614Q5VZ46 1190 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 NAA35Q5VZE5 725 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 OR6B2Q6IFH4 312 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 PGBD2Q6P3X8 592 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 ALKBH5Q6P6C2 394 aaKnown RBP6.41□□□□□ -1.38
VIM-207ENST00000495528 ZNF788Q6ZQV5 615 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 ABI3BPQ7Z7G0 1075 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 PNLDC1Q8NA58 520 aaKnown RBP6.41□□□□□ -1.38
VIM-207ENST00000495528 TMEM35BQ8NCS4 154 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 CCDC112Q8NEF3 446 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 MAPK15Q8TD08 544 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 SNRNP27Q8WVK2 155 aaKnown RBP6.41□□□□□ -1.38
VIM-207ENST00000495528 ATXN7L3BQ96GX2 97 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 HS6ST2Q96MM7 605 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 WDR24Q96S15 920 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 PSMB7Q99436 277 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 EIF3CQ99613 913 aaKnown RBP6.41□□□□□ -1.38
VIM-207ENST00000495528 PRPF18Q99633 342 aaKnown RBP6.41□□□□□ -1.38
VIM-207ENST00000495528 DESI2Q9BSY9 194 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 SYT11Q9BT88 431 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 TRIM62Q9BVG3 475 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 OBP2BQ9NPH6 170 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 THSD1Q9NS62 852 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 DDIT4Q9NX09 232 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 ASIC5Q9NY37 505 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 VPS28Q9UK41 221 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 TFR2Q9UP52 801 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 COX11Q9Y6N1 276 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 KALRNO60229 2985 aa6.41□□□□□ -1.38
VIM-207ENST00000495528 DOCK9Q9BZ29 2069 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 A0A0D9SEW6 157 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 CPED1A4D0V7 1026 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 EME2A4GXA9 379 aaPredicted RBP6.4□□□□□ -1.38
VIM-207ENST00000495528 K7ENP7 123 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 RAD51BO15315 384 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 PROP1O75360 226 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 CLDN11O75508 207 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 GRAP2O75791 330 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 TNFRSF6BO95407 300 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 CSF2P04141 144 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 H2AFZP0C0S5 128 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 SLC2A3P11169 496 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 GZMAP12544 262 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 UNGP13051 313 aaPredicted RBP6.4□□□□□ -1.38
VIM-207ENST00000495528 APEHP13798 732 aaKnown RBP6.4□□□□□ -1.38
VIM-207ENST00000495528 ZNF37AP17032 561 aaPredicted RBP6.4□□□□□ -1.38
VIM-207ENST00000495528 RRM1P23921 792 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 RBMS1P29558 406 aaKnown RBP6.4□□□□□ -1.38
VIM-207ENST00000495528 GSTM5P46439 218 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 CDH4P55283 916 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 HNRNPKP61978 463 aaKnown RBP eCLIP6.4□□□□□ -1.38
VIM-207ENST00000495528 KRT83P78385 493 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 TXNL4AP83876 142 aaKnown RBP6.4□□□□□ -1.38
VIM-207ENST00000495528 CCDC15Q0P6D6 951 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 NME3Q13232 169 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 PDCLQ13371 301 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 FZD2Q14332 565 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 CDKN3Q16667 212 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 C5orf22Q49AR2 442 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 EFHC1Q5JVL4 640 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 TPRG1LQ5T0D9 272 aa6.4□□□□□ -1.38
VIM-207ENST00000495528 GUSBP11Q6P575 273 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms