RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 TMBIM4Q9HC24 238 aa16.47■□□□□ 0.23
SNX17-209ENST00000494893 SLC6A20Q9NP91 592 aa16.47■□□□□ 0.23
SNX17-209ENST00000494893 EURLQ9NYK6 297 aa16.47■□□□□ 0.23
SNX17-209ENST00000494893 STOX2Q9P2F5 926 aaPredicted RBP16.47■□□□□ 0.23
SNX17-209ENST00000494893 ZNF180Q9UJW8 692 aa16.47■□□□□ 0.23
SNX17-209ENST00000494893 KLK4Q9Y5K2 254 aa16.47■□□□□ 0.23
SNX17-209ENST00000494893 IKBKGQ9Y6K9 419 aa16.47■□□□□ 0.23
SNX17-209ENST00000494893 SNRNP200O75643 2136 aaKnown RBP16.46■□□□□ 0.23
SNX17-209ENST00000494893 IGKV1-8A0A0C4DH67 115 aa16.46■□□□□ 0.23
SNX17-209ENST00000494893 HMX2A2RU54 273 aa16.46■□□□□ 0.23
SNX17-209ENST00000494893 GOLGA6L10A6NI86 522 aa16.46■□□□□ 0.23
SNX17-209ENST00000494893 CDC7O00311 574 aa16.46■□□□□ 0.23
SNX17-209ENST00000494893 SLC16A5O15375 505 aa16.46■□□□□ 0.23
SNX17-209ENST00000494893 PHGDHO43175 533 aaKnown RBP16.46■□□□□ 0.23
SNX17-209ENST00000494893 CTSVO60911 334 aa16.46■□□□□ 0.23
SNX17-209ENST00000494893 INHBAP08476 426 aa16.46■□□□□ 0.23
SNX17-209ENST00000494893 POU4F1Q01851 419 aa16.46■□□□□ 0.23
SNX17-209ENST00000494893 COL9A2Q14055 689 aaPredicted RBP16.46■□□□□ 0.23
SNX17-209ENST00000494893 MAP7Q14244 749 aa16.46■□□□□ 0.23
SNX17-209ENST00000494893 ZKSCAN8Q15776 578 aaPredicted RBP16.46■□□□□ 0.23
SNX17-209ENST00000494893 PPP1R3AQ16821 1122 aa16.46■□□□□ 0.23
SNX17-209ENST00000494893 BPHLQ86WA6 291 aaPredicted RBP16.46■□□□□ 0.23
SNX17-209ENST00000494893 NLGN4XQ8N0W4 816 aa16.46■□□□□ 0.23
SNX17-209ENST00000494893 RAB42Q8N4Z0 105 aa16.46■□□□□ 0.23
SNX17-209ENST00000494893 NLGN4YQ8NFZ3 816 aaPredicted RBP16.46■□□□□ 0.23
SNX17-209ENST00000494893 OR8K5Q8NH50 307 aa16.46■□□□□ 0.23
SNX17-209ENST00000494893 SPRTNQ9H040 489 aaPredicted RBP16.46■□□□□ 0.23
SNX17-209ENST00000494893 SYNPO2LQ9H987 977 aa16.46■□□□□ 0.23
SNX17-209ENST00000494893 PARVBQ9HBI1 364 aa16.46■□□□□ 0.23
SNX17-209ENST00000494893 POPDC3Q9HBV1 291 aa16.46■□□□□ 0.23
SNX17-209ENST00000494893 PSMC3IPQ9P2W1 217 aaPredicted RBP16.46■□□□□ 0.23
SNX17-209ENST00000494893 LGALS13Q9UHV8 139 aa16.46■□□□□ 0.23
SNX17-209ENST00000494893 TERTO14746 1132 aaKnown RBP16.45■□□□□ 0.22
SNX17-209ENST00000494893 SCRG1O75711 98 aa16.45■□□□□ 0.22
SNX17-209ENST00000494893 FKBP9O95302 570 aa16.45■□□□□ 0.22
SNX17-209ENST00000494893 LIFP15018 202 aa16.45■□□□□ 0.22
SNX17-209ENST00000494893 CYP2A7P20853 494 aa16.45■□□□□ 0.22
SNX17-209ENST00000494893 F8A1P23610 371 aa16.45■□□□□ 0.22
SNX17-209ENST00000494893 MAP4P27816 1152 aaKnown RBP16.45■□□□□ 0.22
SNX17-209ENST00000494893 HSD17B2P37059 387 aa16.45■□□□□ 0.22
SNX17-209ENST00000494893 STAT5AP42229 794 aa16.45■□□□□ 0.22
SNX17-209ENST00000494893 GPS2Q13227 327 aa16.45■□□□□ 0.22
SNX17-209ENST00000494893 USP10Q14694 798 aaKnown RBP16.45■□□□□ 0.22
SNX17-209ENST00000494893 GRTP1Q5TC63 336 aa16.45■□□□□ 0.22
SNX17-209ENST00000494893 CYB5D1Q6P9G0 228 aa16.45■□□□□ 0.22
SNX17-209ENST00000494893 C6orf15Q6UXA7 325 aaPredicted RBP16.45■□□□□ 0.22
SNX17-209ENST00000494893 GOLGA6L1Q8N7Z2 621 aa16.45■□□□□ 0.22
SNX17-209ENST00000494893 MCOLN3Q8TDD5 553 aa16.45■□□□□ 0.22
SNX17-209ENST00000494893 SNRNP27Q8WVK2 155 aaKnown RBP16.45■□□□□ 0.22
SNX17-209ENST00000494893 PGM2Q96G03 612 aa16.45■□□□□ 0.22
SNX17-209ENST00000494893 SYTL2Q9HCH5 934 aa16.45■□□□□ 0.22
SNX17-209ENST00000494893 WDR70Q9NW82 654 aa16.45■□□□□ 0.22
SNX17-209ENST00000494893 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.45■□□□□ 0.22
SNX17-209ENST00000494893 CTNNAL1Q9UBT7 734 aa16.45■□□□□ 0.22
SNX17-209ENST00000494893 TAC3Q9UHF0 121 aa16.45■□□□□ 0.22
SNX17-209ENST00000494893 CHD6Q8TD26 2715 aa16.45■□□□□ 0.22
SNX17-209ENST00000494893 MGAQ8IWI9 3026 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 OR2A25A4D2G3 310 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 NPEPPSL1A6NEC2 478 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 K7ENP7 123 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 RGS16O15492 202 aaPredicted RBP16.44■□□□□ 0.22
SNX17-209ENST00000494893 SPRP35270 261 aaPredicted RBP16.44■□□□□ 0.22
SNX17-209ENST00000494893 GCGRP47871 477 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 SERPINB9P50453 376 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 CSRP3P50461 194 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 ATP1A2P50993 1020 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 ITGA1P56199 1179 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 CXADRP78310 365 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 ABHD18Q0P651 414 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 MANEAQ5SRI9 462 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 AGBL2Q5U5Z8 902 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 BROXQ5VW32 411 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 LCN10Q6JVE6 187 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 INO80CQ6PI98 192 aaPredicted RBP16.44■□□□□ 0.22
SNX17-209ENST00000494893 AGTRAPQ6RW13 159 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 CMC1Q7Z7K0 106 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 TMEM126BQ8IUX1 230 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 SYTL1Q8IYJ3 562 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 SPATA6LQ8N4H0 392 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 NKAPQ8N5F7 415 aaKnown RBP16.44■□□□□ 0.22
SNX17-209ENST00000494893 IL22RA1Q8N6P7 574 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 ARL8AQ96BM9 186 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 CCDC138Q96M89 665 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 UNKQ9C0B0 810 aaKnown RBP16.44■□□□□ 0.22
SNX17-209ENST00000494893 CENPHQ9H3R5 247 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 GPAMQ9HCL2 828 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 MED4Q9NPJ6 270 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 TXNDC16Q9P2K2 825 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 IL17BQ9UHF5 180 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 LHX6Q9UPM6 363 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 SH2B3Q9UQQ2 575 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 PCDHB3Q9Y5E6 796 aa16.44■□□□□ 0.22
SNX17-209ENST00000494893 ZFYVE26Q68DK2 2539 aa16.43■□□□□ 0.22
SNX17-209ENST00000494893 LOC400499M0QZD8 3231 aa16.43■□□□□ 0.22
SNX17-209ENST00000494893 TARM1B6A8C7 271 aa16.43■□□□□ 0.22
SNX17-209ENST00000494893 RPA3P35244 121 aaPredicted RBP16.43■□□□□ 0.22
SNX17-209ENST00000494893 RORAP35398 523 aa16.43■□□□□ 0.22
SNX17-209ENST00000494893 UCNP55089 124 aa16.43■□□□□ 0.22
SNX17-209ENST00000494893 TMPRSS3P57727 454 aa16.43■□□□□ 0.22
SNX17-209ENST00000494893 TBPL1P62380 186 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms