RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 NKG7Q16617 165 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 CYP2A13Q16696 494 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 FAM214AQ32MH5 1076 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 PLEKHN1Q494U1 663 aaPredicted RBP9.18□□□□□ -0.94
MSH5-218ENST00000494646 PRR30Q53SZ7 412 aaPredicted RBP9.18□□□□□ -0.94
MSH5-218ENST00000494646 HSP90AA5PQ58FG0 334 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 TCTE1Q5JU00 501 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 DCAF10Q5QP82 559 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 PAPD7Q5XG87 772 aaKnown RBP9.18□□□□□ -0.94
MSH5-218ENST00000494646 JMJD6Q6NYC1 403 aaPredicted RBP9.18□□□□□ -0.94
MSH5-218ENST00000494646 CYHR1Q6ZMK1 362 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 MRGPREQ86SM8 312 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 PRSS58Q8IYP2 241 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 GALNT16Q8N428 558 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 TTC29Q8NA56 475 aaPredicted RBP9.18□□□□□ -0.94
MSH5-218ENST00000494646 HMGCLL1Q8TB92 370 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 ACTRT1Q8TDG2 376 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 INPP5DQ92835 1189 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 COL26A1Q96A83 441 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 NAP1L3Q99457 506 aaPredicted RBP9.18□□□□□ -0.94
MSH5-218ENST00000494646 GPR21Q99679 349 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 DPH7Q9BTV6 452 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 YIPF2Q9BWQ6 316 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 RAB11FIP5Q9BXF6 653 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 CCDC68Q9H2F9 335 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 GRPEL1Q9HAV7 217 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 ZBTB20Q9HC78 741 aaPredicted RBP9.18□□□□□ -0.94
MSH5-218ENST00000494646 XAB2Q9HCS7 855 aaKnown RBP9.18□□□□□ -0.94
MSH5-218ENST00000494646 ATP13A2Q9NQ11 1180 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 SLAMF7Q9NQ25 335 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 INTS10Q9NVR2 710 aaKnown RBP9.18□□□□□ -0.94
MSH5-218ENST00000494646 SPATA7Q9P0W8 599 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 CDC23Q9UJX2 597 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 VPS4AQ9UN37 437 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 PTPN13Q12923 2485 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 A0A1B0GX78 115 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 H0YGG7 62 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 ZSCAN12O43309 604 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 ZBTB14O43829 449 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 CATP04040 527 aaKnown RBP9.17□□□□□ -0.94
MSH5-218ENST00000494646 ERVK-10P10266 1014 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 RPA3P35244 121 aaPredicted RBP9.17□□□□□ -0.94
MSH5-218ENST00000494646 PNLIPRP1P54315 467 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 ARF3P61204 181 aaPredicted RBP9.17□□□□□ -0.94
MSH5-218ENST00000494646 LONRF1Q17RB8 773 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 TTLL9Q3SXZ7 439 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 HP1BP3Q5SSJ5 553 aaPredicted RBP9.17□□□□□ -0.94
MSH5-218ENST00000494646 COX15Q7KZN9 410 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 PPIL6Q8IXY8 311 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 CPNE9Q8IYJ1 553 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 Q8NA96 180 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 CLEC1AQ8NC01 280 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 GIMAP7Q8NHV1 300 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 GRK7Q8WTQ7 553 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 ZNF480Q8WV37 535 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 SMPDL3AQ92484 453 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 C19orf60Q96EN9 201 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 ZNF285Q96NJ3 590 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 IP6K3Q96PC2 410 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 SMAD5Q99717 465 aaKnown RBP9.17□□□□□ -0.94
MSH5-218ENST00000494646 MESP1Q9BRJ9 268 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 DDX47Q9H0S4 455 aaKnown RBP9.17□□□□□ -0.94
MSH5-218ENST00000494646 ZNF552Q9H707 407 aaPredicted RBP9.17□□□□□ -0.94
MSH5-218ENST00000494646 SYNPO2LQ9H987 977 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 ZNF304Q9HCX3 659 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 SLC6A20Q9NP91 592 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 MRPS30Q9NP92 439 aaKnown RBP9.17□□□□□ -0.94
MSH5-218ENST00000494646 TAC3Q9UHF0 121 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 FBXO5Q9UKT4 447 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 SNX12Q9UMY4 172 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 VPS9D1Q9Y2B5 631 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 MED16Q9Y2X0 877 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 DHRS7Q9Y394 339 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 MAP4K5Q9Y4K4 846 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 PCDHGB7Q9Y5F8 929 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 FAM169AQ9Y6X4 670 aa9.17□□□□□ -0.94
MSH5-218ENST00000494646 IGKV1-8A0A0C4DH67 115 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 OR2A25A4D2G3 310 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 FITM1A5D6W6 292 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 AGPSO00116 658 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 MYO1CO00159 1063 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 SOCS6O14544 535 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 FFAR3O14843 346 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 GPR42O15529 346 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 FKBP9O95302 570 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 ONECUT2O95948 504 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 ALBP02768 609 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 STATHP02808 62 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 MPC1LP0DKB6 136 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 ITGA3P26006 1051 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 ATP5DP30049 168 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 MAGEA3P43357 314 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 CARSP49589 748 aaKnown RBP9.16□□□□□ -0.94
MSH5-218ENST00000494646 PRDX1Q06830 199 aaKnown RBP9.16□□□□□ -0.94
MSH5-218ENST00000494646 DHX9Q08211 1270 aaKnown RBP9.16□□□□□ -0.94
MSH5-218ENST00000494646 MYBPC3Q14896 1274 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 HKDC1Q2TB90 917 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 EIF2S3LQ2VIR3 472 aaKnown RBP9.16□□□□□ -0.94
MSH5-218ENST00000494646 MSS51Q4VC12 460 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 VWA2Q5GFL6 755 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms