RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 KIF5AQ12840 1032 aa12.07□□□□□ -0.48
SKA1-205ENST00000494518 TSTA3Q13630 321 aaPredicted RBP12.07□□□□□ -0.48
SKA1-205ENST00000494518 FASTKQ14296 549 aaKnown RBP12.07□□□□□ -0.48
SKA1-205ENST00000494518 VWA2Q5GFL6 755 aa12.07□□□□□ -0.48
SKA1-205ENST00000494518 AARS2Q5JTZ9 985 aaKnown RBP12.07□□□□□ -0.48
SKA1-205ENST00000494518 FAAH2Q6GMR7 532 aa12.07□□□□□ -0.48
SKA1-205ENST00000494518 TTC23LQ6PF05 361 aa12.07□□□□□ -0.48
SKA1-205ENST00000494518 IGFL2Q6UWQ7 119 aa12.07□□□□□ -0.48
SKA1-205ENST00000494518 CES3Q6UWW8 571 aa12.07□□□□□ -0.48
SKA1-205ENST00000494518 NLRP9Q7RTR0 991 aa12.07□□□□□ -0.48
SKA1-205ENST00000494518 SRRM1Q8IYB3 904 aaKnown RBP12.07□□□□□ -0.48
SKA1-205ENST00000494518 CCDC89Q8N998 374 aa12.07□□□□□ -0.48
SKA1-205ENST00000494518 OR2L3Q8NG85 312 aa12.07□□□□□ -0.48
SKA1-205ENST00000494518 STT3BQ8TCJ2 826 aa12.07□□□□□ -0.48
SKA1-205ENST00000494518 RAD51AP1Q96B01 352 aa12.07□□□□□ -0.48
SKA1-205ENST00000494518 HES6Q96HZ4 224 aa12.07□□□□□ -0.48
SKA1-205ENST00000494518 ZNF285Q96NJ3 590 aa12.07□□□□□ -0.48
SKA1-205ENST00000494518 BAG1Q99933 345 aaPredicted RBP12.07□□□□□ -0.48
SKA1-205ENST00000494518 YIPF2Q9BWQ6 316 aa12.07□□□□□ -0.48
SKA1-205ENST00000494518 MRM3Q9HC36 420 aaKnown RBP12.07□□□□□ -0.48
SKA1-205ENST00000494518 ZNF304Q9HCX3 659 aa12.07□□□□□ -0.48
SKA1-205ENST00000494518 SEMA3GQ9NS98 782 aa12.07□□□□□ -0.48
SKA1-205ENST00000494518 PLA2G3Q9NZ20 509 aa12.07□□□□□ -0.48
SKA1-205ENST00000494518 GNPTGQ9UJJ9 305 aa12.07□□□□□ -0.48
SKA1-205ENST00000494518 C3orf18Q9UK00 162 aa12.07□□□□□ -0.48
SKA1-205ENST00000494518 RIMKLBQ9ULI2 386 aa12.07□□□□□ -0.48
SKA1-205ENST00000494518 FITM1A5D6W6 292 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 VSTM2BA6NLU5 285 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 MAP2K7O14733 419 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 ZG16O60844 167 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 NIPSNAP2O75323 286 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 NDUFS3O75489 264 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 UQCRHP07919 91 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 CELA2AP08217 269 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 F7P08709 466 aaPredicted RBP12.06□□□□□ -0.48
SKA1-205ENST00000494518 ZGLP1P0C6A0 271 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 ERVK-10P10266 1014 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 ACPPP15309 386 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 FBLP22087 321 aaKnown RBP12.06□□□□□ -0.48
SKA1-205ENST00000494518 NMBRP28336 390 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 STIP1P31948 543 aaKnown RBP12.06□□□□□ -0.48
SKA1-205ENST00000494518 TTPAP49638 278 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 OCA2Q04671 838 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 FAM214AQ32MH5 1076 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 CTSL3PQ5NE16 218 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 YOD1Q5VVQ6 348 aaPredicted RBP12.06□□□□□ -0.48
SKA1-205ENST00000494518 C1QL3Q5VWW1 255 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 FAM180AQ6UWF9 173 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 ISLR2Q6UXK2 745 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 OTOAQ7RTW8 1153 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 LAPTM4BQ86VI4 370 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 FJX1Q86VR8 437 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 SLC13A5Q86YT5 568 aaPredicted RBP12.06□□□□□ -0.48
SKA1-205ENST00000494518 TMEM139Q8IV31 216 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 SIRT6Q8N6T7 355 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 OR1N1Q8NGS0 311 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 FAR1Q8WVX9 515 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 MIEF2Q96C03 454 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 MRFAP1L1Q96HT8 127 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 CABS1Q96KC9 395 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 C10orf90Q96M02 699 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 PANX3Q96QZ0 392 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 RAB11FIP5Q9BXF6 653 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 RBSNQ9H1K0 784 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 P2RY12Q9H244 342 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 SYNPO2LQ9H987 977 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 ABCF3Q9NUQ8 709 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 PTGFRNQ9P2B2 879 aa12.06□□□□□ -0.48
SKA1-205ENST00000494518 NXT1Q9UKK6 140 aaKnown RBP12.06□□□□□ -0.48
SKA1-205ENST00000494518 A0A1W2PPV9 198 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 ENO4A6NNW6 628 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 HPP00738 406 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 EDN3P14138 238 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 FMO4P31512 558 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 RPL22P35268 128 aaKnown RBP12.05□□□□□ -0.48
SKA1-205ENST00000494518 KCNK10P57789 538 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 ARG2P78540 354 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 MFAP5Q13361 173 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 DSG2Q14126 1118 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 TLR1Q15399 786 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 PCID2Q5JVF3 399 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 SUSD1Q6UWL2 747 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 RNF44Q7L0R7 432 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 RAB42Q8N4Z0 105 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 OR2A1Q8NGT9 310 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 BRIX1Q8TDN6 353 aaKnown RBP12.05□□□□□ -0.48
SKA1-205ENST00000494518 ZUFSPQ96AP4 578 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 NACC2Q96BF6 587 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 FOPNLQ96NB1 174 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 DPH7Q9BTV6 452 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 OLAHQ9NV23 265 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 SYBUQ9NX95 663 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 PAK5Q9P286 719 aa12.05□□□□□ -0.48
SKA1-205ENST00000494518 ZNF282Q9UDV7 671 aaPredicted RBP12.05□□□□□ -0.48
SKA1-205ENST00000494518 POLQO75417 2590 aa12.04□□□□□ -0.48
SKA1-205ENST00000494518 TARM1B6A8C7 271 aa12.04□□□□□ -0.48
SKA1-205ENST00000494518 H0YGG7 62 aa12.04□□□□□ -0.48
SKA1-205ENST00000494518 SRPX2O60687 465 aaPredicted RBP12.04□□□□□ -0.48
SKA1-205ENST00000494518 STATHP02808 62 aa12.04□□□□□ -0.48
SKA1-205ENST00000494518 COX6A1P12074 109 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms