RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 CEACAM5P06731 702 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 ERGP11308 486 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 ACADSP16219 412 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 ATP6V1C1P21283 382 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 PEX2P28328 305 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 MAT2AP31153 395 aaKnown RBP15.98■□□□□ 0.15
ATG4B-225ENST00000494465 PHC1P78364 1004 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 DMPKQ09013 629 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 DHFR2Q86XF0 187 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 DCUN1D3Q8IWE4 304 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 SLCO4A1Q96BD0 722 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 SIPA1Q96FS4 1042 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 DUS3LQ96G46 650 aaKnown RBP15.98■□□□□ 0.15
ATG4B-225ENST00000494465 MRGPRX1Q96LB2 322 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 HHIPQ96QV1 700 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 NRTNQ99748 197 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 MENTQ9BUN1 341 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 BRF2Q9HAW0 419 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 PREBQ9HCU5 417 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 VPS29Q9UBQ0 182 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 MCM8Q9UJA3 840 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 FZD4Q9ULV1 537 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 PLAGL1Q9UM63 463 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 SCML1Q9UN30 329 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 PCDHGA11Q9Y5H2 935 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 TBC1D3DA0A087WVF3 549 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 TBC1D3IA0A087WXS9 549 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 TBC1D3EA0A087X179 549 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 TBC1D3KA0A087X1G2 549 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 TBC1D3FA6NER0 549 aaPredicted RBP15.98■□□□□ 0.15
ATG4B-225ENST00000494465 TBC1D3LB9A6J9 549 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 IL6P05231 212 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 TBC1D3HP0C7X1 549 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 GSK3BP49841 420 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 PWP1Q13610 501 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 DDX39BQ13838 428 aaKnown RBP15.98■□□□□ 0.15
ATG4B-225ENST00000494465 TBC1D3GQ6DHY5 549 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 TBC1D3CQ6IPX1 549 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 NOXRED1Q6NXP6 359 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 TMEM92Q6UXU6 159 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 PRR23BQ6ZRT6 265 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 RIMKLAQ8IXN7 391 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 TBC1D3Q8IZP1 549 aaPredicted RBP15.98■□□□□ 0.15
ATG4B-225ENST00000494465 OR5K2Q8NHB8 316 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 ZUFSPQ96AP4 578 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 RAD51AP1Q96B01 352 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 RSRC1Q96IZ7 334 aaKnown RBP15.98■□□□□ 0.15
ATG4B-225ENST00000494465 EGLN2Q96KS0 407 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 PPM1MQ96MI6 270 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 TSSK3Q96PN8 268 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 ZNF184Q99676 751 aaPredicted RBP15.98■□□□□ 0.15
ATG4B-225ENST00000494465 ALG2Q9H553 416 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 PPT2Q9UMR5 302 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 SLC17A4Q9Y2C5 497 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 CFAP20Q9Y6A4 193 aaKnown RBP15.98■□□□□ 0.15
ATG4B-225ENST00000494465 MAGEB17A8MXT2 336 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 HSD3B1P14060 373 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 KELP23276 732 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 HSD3B2P26439 372 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 RPL10P27635 214 aaKnown RBP15.97■□□□□ 0.15
ATG4B-225ENST00000494465 EEFSECP57772 596 aaKnown RBP15.97■□□□□ 0.15
ATG4B-225ENST00000494465 LIPEQ05469 1076 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 BNIP2Q12982 314 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 ATG9BQ674R7 924 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 CAPRIN2Q6IMN6 1127 aaKnown RBP15.97■□□□□ 0.15
ATG4B-225ENST00000494465 USP30Q70CQ3 517 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 HUS1BQ8NHY5 278 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 CGREF1Q99674 301 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 CCDC177Q9NQR7 707 aaPredicted RBP15.97■□□□□ 0.15
ATG4B-225ENST00000494465 GEMIN8Q9NWZ8 242 aaKnown RBP15.97■□□□□ 0.15
ATG4B-225ENST00000494465 VAPAQ9P0L0 249 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 EGFL7Q9UHF1 273 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 WDR37Q9Y2I8 494 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 C15orf38-AP3S2A0A0A6YYH1 394 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 KLHL33A6NCF5 533 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 PRR19A6NJB7 356 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 MAPK1P28482 360 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 TSTA3Q13630 321 aaPredicted RBP15.97■□□□□ 0.15
ATG4B-225ENST00000494465 SELPLGQ14242 412 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 FXNQ16595 210 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 LRRC36Q1X8D7 754 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 IZUMO2Q6UXV1 221 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 CHST15Q7LFX5 561 aaPredicted RBP15.97■□□□□ 0.15
ATG4B-225ENST00000494465 ARPINQ7Z6K5 226 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 PTRH1Q86Y79 214 aaKnown RBP15.97■□□□□ 0.15
ATG4B-225ENST00000494465 RPLP0P6Q8NHW5 317 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 APOOQ9BUR5 198 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 BTBD1Q9H0C5 482 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 EHD1Q9H4M9 534 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 ACTR3BQ9P1U1 418 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 USP22Q9UPT9 525 aa15.97■□□□□ 0.15
ATG4B-225ENST00000494465 SLC31A1O15431 190 aa15.96■□□□□ 0.15
ATG4B-225ENST00000494465 NARSO43776 548 aaKnown RBP15.96■□□□□ 0.15
ATG4B-225ENST00000494465 ASGR2P07307 311 aa15.96■□□□□ 0.15
ATG4B-225ENST00000494465 C1GALT1C1LP0DN25 315 aa15.96■□□□□ 0.15
ATG4B-225ENST00000494465 ACP5P13686 325 aa15.96■□□□□ 0.15
ATG4B-225ENST00000494465 CLCNKAP51800 687 aa15.96■□□□□ 0.15
ATG4B-225ENST00000494465 PLIN5Q00G26 463 aa15.96■□□□□ 0.15
ATG4B-225ENST00000494465 TRIP10Q15642 601 aa15.96■□□□□ 0.15
ATG4B-225ENST00000494465 OGFRL1Q5TC84 451 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms