RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 TRIM49D1C9J1S8 452 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 H3BMH7 237 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 RRP8O43159 456 aaKnown RBP13.01□□□□□ -0.33
COL1A1-208ENST00000494334 NRP2O60462 931 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 KIAA0754O94854 1291 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 CTSBP07858 339 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 ANXA5P08758 320 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 LTA4HP09960 611 aaKnown RBP13.01□□□□□ -0.33
COL1A1-208ENST00000494334 CNTFP26441 200 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 KCNC1P48547 511 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 SERPINB8P50452 374 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 ABATP80404 500 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 NAA30Q147X3 362 aaPredicted RBP13.01□□□□□ -0.33
COL1A1-208ENST00000494334 PRAMEF17Q5VTA0 474 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 PRAMEF13Q5VWM6 474 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 CAPN13Q6MZZ7 669 aaPredicted RBP13.01□□□□□ -0.33
COL1A1-208ENST00000494334 FRA10AC1Q70Z53 315 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 TAOK1Q7L7X3 1001 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 TIPARPQ7Z3E1 657 aaKnown RBP13.01□□□□□ -0.33
COL1A1-208ENST00000494334 CCDC91Q7Z6B0 441 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 ISCA2Q86U28 154 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 CENPLQ8N0S6 344 aaPredicted RBP13.01□□□□□ -0.33
COL1A1-208ENST00000494334 OR56A3Q8NH54 315 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 AENQ8WTP8 325 aaKnown RBP13.01□□□□□ -0.33
COL1A1-208ENST00000494334 KCTD4Q8WVF5 259 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 ATL1Q8WXF7 558 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 ALKBH8Q96BT7 664 aaKnown RBP13.01□□□□□ -0.33
COL1A1-208ENST00000494334 PYCR2Q96C36 320 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 MED8Q96G25 268 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 DPH7Q9BTV6 452 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 SGPP1Q9BX95 441 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 DPH1Q9BZG8 443 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 ULBP3Q9BZM4 244 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 NMRAL1Q9HBL8 299 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 FETUBQ9UGM5 382 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 SERTAD3Q9UJW9 196 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 PLCL2Q9UPR0 1127 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 URB1O60287 2271 aaKnown RBP13.01□□□□□ -0.33
COL1A1-208ENST00000494334 IGF2RP11717 2491 aa13.01□□□□□ -0.33
COL1A1-208ENST00000494334 ADAMTS20P59510 1910 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 TEX51A0A1B0GUA7 166 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 OR2A25A4D2G3 310 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 NCF1BA6NI72 391 aaPredicted RBP13□□□□□ -0.33
COL1A1-208ENST00000494334 NCF1CA8MVU1 366 aaPredicted RBP13□□□□□ -0.33
COL1A1-208ENST00000494334 KLK10O43240 276 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 RAD1O60671 282 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 CTSVO60911 334 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 SCRG1O75711 98 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 KRT37O76014 449 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 CCNDBP1O95273 360 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 SHBGP04278 402 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 NTRK1P04629 796 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 SNRPAP09012 282 aaKnown RBP13□□□□□ -0.33
COL1A1-208ENST00000494334 NCF1P14598 390 aaPredicted RBP13□□□□□ -0.33
COL1A1-208ENST00000494334 NPPBP16860 134 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 TFEBP19484 476 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 CCND1P24385 295 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 ITPKBP27987 946 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 HSD17B3P37058 310 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 NAA25Q14CX7 972 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 TAF1BQ53T94 588 aaPredicted RBP13□□□□□ -0.33
COL1A1-208ENST00000494334 ZC3H12BQ5HYM0 836 aaKnown RBP13□□□□□ -0.33
COL1A1-208ENST00000494334 LGSNQ5TDP6 509 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 ZNF425Q6IV72 752 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 FBXO42Q6P3S6 717 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 LCTLQ6UWM7 567 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 LRRC69Q6ZNQ3 347 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 GPSM1Q86YR5 675 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 TMEM126BQ8IUX1 230 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 MCATQ8IVS2 390 aaKnown RBP13□□□□□ -0.33
COL1A1-208ENST00000494334 SPACA3Q8IXA5 215 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 PLD6Q8N2A8 252 aaKnown RBP13□□□□□ -0.33
COL1A1-208ENST00000494334 STAG3L4Q8TBR4 150 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 N4BP2L2Q92802 583 aaPredicted RBP13□□□□□ -0.33
COL1A1-208ENST00000494334 NKD1Q969G9 470 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 RHBDF1Q96CC6 855 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 OR4K3Q96R72 315 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 EGFL8Q99944 293 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 CCDC77Q9BR77 488 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 PLCD4Q9BRC7 762 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 SPRTNQ9H040 489 aaPredicted RBP13□□□□□ -0.33
COL1A1-208ENST00000494334 PCBD2Q9H0N5 130 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 VPS11Q9H270 941 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 ALG9Q9H6U8 611 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 CUEDC1Q9NWM3 386 aaPredicted RBP13□□□□□ -0.33
COL1A1-208ENST00000494334 EURLQ9NYK6 297 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 ANKMY1Q9P2S6 941 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 SSUH2Q9Y2M2 353 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 ACACAQ13085 2346 aa13□□□□□ -0.33
COL1A1-208ENST00000494334 A0A0J9YVX5 310 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 E7EQ34 232 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 H7BY64 318 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 KLHL2O95198 593 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 HNMTP50135 292 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 ITGA1P56199 1179 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 MAP7Q14244 749 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 ACAP2Q15057 778 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 FAM83EQ2M2I3 478 aa12.99□□□□□ -0.33
COL1A1-208ENST00000494334 C18orf21Q32NC0 220 aaPredicted RBP12.99□□□□□ -0.33
COL1A1-208ENST00000494334 PTCHD3Q3KNS1 767 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms