RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 UGT1A6P19224 532 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 UGT1A1P22309 533 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 UGT1A4P22310 534 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 UGT1A3P35503 534 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 TARDBPQ13148 414 aaKnown RBP eCLIP18.69■□□□□ 0.58
COL27A1-207ENST00000494090 E2F2Q14209 437 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 RNASE12Q5GAN4 147 aaKnown RBP18.69■□□□□ 0.58
COL27A1-207ENST00000494090 ADGRD2Q7Z7M1 963 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 OSTM1Q86WC4 334 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 IGDCC3Q8IVU1 814 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 JSRP1Q96MG2 331 aaPredicted RBP18.69■□□□□ 0.58
COL27A1-207ENST00000494090 POLR2J3Q9H1A7 115 aaKnown RBP18.69■□□□□ 0.58
COL27A1-207ENST00000494090 MED28Q9H204 178 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 SIRPGQ9P1W8 387 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 LRRC42Q9Y546 428 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 TTC24A2A3L6 582 aaPredicted RBP18.69■□□□□ 0.58
COL27A1-207ENST00000494090 TRIM3O75382 744 aaPredicted RBP18.69■□□□□ 0.58
COL27A1-207ENST00000494090 DLDP09622 509 aaKnown RBP18.69■□□□□ 0.58
COL27A1-207ENST00000494090 AZGP1P25311 298 aaKnown RBP18.69■□□□□ 0.58
COL27A1-207ENST00000494090 HSF2Q03933 536 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 NPTX1Q15818 432 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 ENPP7Q6UWV6 458 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 LINC00471Q8N535 108 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 ZSWIM3Q96MP5 696 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 DPYSL5Q9BPU6 564 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 FANCFQ9NPI8 374 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 MARK1Q9P0L2 795 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 PRKAB1Q9Y478 270 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 AKAP8O43823 692 aaKnown RBP18.68■□□□□ 0.58
COL27A1-207ENST00000494090 DNAJB13P59910 316 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 TIGD6Q17RP2 521 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 SMU1Q2TAY7 513 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 SMYD5Q6GMV2 418 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 SLC8B1Q6J4K2 584 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 FAM43BQ6ZT52 329 aaPredicted RBP18.68■□□□□ 0.58
COL27A1-207ENST00000494090 SMPDL3AQ92484 453 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 ZCCHC3Q9NUD5 404 aaKnown RBP18.68■□□□□ 0.58
COL27A1-207ENST00000494090 FLRT1Q9NZU1 646 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 A0A1W2PP18 115 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 CD36P16671 472 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 JAG1P78504 1218 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 SLBPQ14493 270 aaKnown RBP eCLIP18.68■□□□□ 0.58
COL27A1-207ENST00000494090 ARSIQ5FYB1 569 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 RASSF6Q6ZTQ3 369 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 ERMP1Q7Z2K6 904 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 PIM3Q86V86 326 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 ENDOVQ8N8Q3 282 aaKnown RBP18.68■□□□□ 0.58
COL27A1-207ENST00000494090 SUN3Q8TAQ9 357 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 SCLYQ96I15 445 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 SLC39A3Q9BRY0 314 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 GSDMCQ9BYG8 508 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 BHLHE41Q9C0J9 482 aaPredicted RBP18.68■□□□□ 0.58
COL27A1-207ENST00000494090 C14orf105Q9NVL8 296 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 TMED5Q9Y3A6 229 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 GRIP1Q9Y3R0 1128 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 ELOA3DA6NLF2 546 aaPredicted RBP18.68■□□□□ 0.58
COL27A1-207ENST00000494090 FAM189A1O60320 539 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 PRKD3O94806 890 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 ENGP17813 658 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 ELOA3BQ3SY89 546 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 CRTC2Q53ET0 693 aaPredicted RBP18.68■□□□□ 0.58
COL27A1-207ENST00000494090 AKIRIN2Q53H80 203 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 ZNF776Q68DI1 518 aaPredicted RBP18.68■□□□□ 0.58
COL27A1-207ENST00000494090 ELOA3Q8NG57 546 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 BRI3BPQ8WY22 251 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 B3GALT6Q96L58 329 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 RGS17Q9UGC6 210 aaPredicted RBP18.68■□□□□ 0.58
COL27A1-207ENST00000494090 PCDHGB1Q9Y5G3 927 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 A0A1W2PRG6 482 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 ANXA2P2A6NMY6 339 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 COQ9O75208 318 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 ANXA2P07355 339 aaKnown RBP18.68■□□□□ 0.58
COL27A1-207ENST00000494090 RORCP51449 518 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 FRG2Q64ET8 278 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 PAMR1Q6UXH9 720 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 LYSMD3Q7Z3D4 306 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 C2CD4AQ8NCU7 369 aaPredicted RBP18.68■□□□□ 0.58
COL27A1-207ENST00000494090 TAMM41Q96BW9 452 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 FRG2BQ96QU4 278 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 RIOK2Q9BVS4 552 aaKnown RBP18.68■□□□□ 0.58
COL27A1-207ENST00000494090 FZD4Q9ULV1 537 aa18.68■□□□□ 0.58
COL27A1-207ENST00000494090 XRN1Q8IZH2 1706 aaKnown RBP18.67■□□□□ 0.58
COL27A1-207ENST00000494090 GSTT2BP0CG30 244 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 ACVRL1P37023 503 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 PGDP52209 483 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 PUDPQ08623 228 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 GDF6Q6KF10 455 aaPredicted RBP18.67■□□□□ 0.58
COL27A1-207ENST00000494090 CILP2Q8IUL8 1156 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 TMEM126BQ8IUX1 230 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 KIAA1191Q96A73 305 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 CST11Q9H112 138 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 P2RX2Q9UBL9 471 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 MGAT4AQ9UM21 535 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 PHF24Q9UPV7 400 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 CLCA3PQ9Y6N3 262 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 ACRP10323 421 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 ACP5P13686 325 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 GDI1P31150 447 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 ATP4BP51164 291 aa18.67■□□□□ 0.58
COL27A1-207ENST00000494090 TNFAIP8L2Q6P589 184 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms