RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 GRTP1Q5TC63 336 aa3.32□□□□□ -1.88
CD46-217ENST00000493796 CORO6Q6QEF8 472 aa3.32□□□□□ -1.88
CD46-217ENST00000493796 KIF6Q6ZMV9 814 aa3.32□□□□□ -1.88
CD46-217ENST00000493796 AACSQ86V21 672 aa3.32□□□□□ -1.88
CD46-217ENST00000493796 DNAJC22Q8N4W6 341 aa3.32□□□□□ -1.88
CD46-217ENST00000493796 ZNF383Q8NA42 475 aa3.32□□□□□ -1.88
CD46-217ENST00000493796 OR1J1Q8NGS3 322 aa3.32□□□□□ -1.88
CD46-217ENST00000493796 OLIG1Q8TAK6 271 aa3.32□□□□□ -1.88
CD46-217ENST00000493796 HSD17B8Q92506 261 aa3.32□□□□□ -1.88
CD46-217ENST00000493796 GIMAP5Q96F15 307 aa3.32□□□□□ -1.88
CD46-217ENST00000493796 ZNF599Q96NL3 588 aa3.32□□□□□ -1.88
CD46-217ENST00000493796 OR6C1Q96RD1 312 aa3.32□□□□□ -1.88
CD46-217ENST00000493796 C16orf70Q9BSU1 422 aa3.32□□□□□ -1.88
CD46-217ENST00000493796 API5Q9BZZ5 524 aaKnown RBP3.32□□□□□ -1.88
CD46-217ENST00000493796 WDR13Q9H1Z4 485 aa3.32□□□□□ -1.88
CD46-217ENST00000493796 WSB2Q9NYS7 404 aaPredicted RBP3.32□□□□□ -1.88
CD46-217ENST00000493796 LARSQ9P2J5 1176 aaKnown RBP3.32□□□□□ -1.88
CD46-217ENST00000493796 SUCLA2Q9P2R7 463 aaPredicted RBP3.32□□□□□ -1.88
CD46-217ENST00000493796 RHCGQ9UBD6 479 aa3.32□□□□□ -1.88
CD46-217ENST00000493796 CACNG5Q9UF02 275 aa3.32□□□□□ -1.88
CD46-217ENST00000493796 PLAGL1Q9UM63 463 aa3.32□□□□□ -1.88
CD46-217ENST00000493796 PYGO1Q9Y3Y4 419 aa3.32□□□□□ -1.88
CD46-217ENST00000493796 ZNF541Q9H0D2 1346 aa3.32□□□□□ -1.88
CD46-217ENST00000493796 PHIPQ8WWQ0 1821 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 DDX60LQ5H9U9 1706 aaKnown RBP3.31□□□□□ -1.88
CD46-217ENST00000493796 ZNF609O15014 1411 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 MEIOCA2RUB1 952 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 B4DLN1 442 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 E9PI62 339 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 SH2B2O14492 632 aaPredicted RBP3.31□□□□□ -1.88
CD46-217ENST00000493796 TRMUO75648 421 aaKnown RBP3.31□□□□□ -1.88
CD46-217ENST00000493796 EDN1P05305 212 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 MRPL12P52815 198 aaKnown RBP3.31□□□□□ -1.88
CD46-217ENST00000493796 PNLIPRP2P54317 469 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 GRAPQ13588 217 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 P2RY6Q15077 328 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 DUSP28Q4G0W2 176 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 PARP10Q53GL7 1025 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 DCAF10Q5QP82 559 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 PLEKHS1Q5SXH7 462 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 ADAMTSL4-AS1Q5T5F5 129 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 ARHGEF16Q5VV41 709 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 C4orf50Q6ZRC1 276 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 SLC16A9Q7RTY1 509 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 HAUS6Q7Z4H7 955 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 MYPOPQ86VE0 399 aaPredicted RBP3.31□□□□□ -1.88
CD46-217ENST00000493796 MAPK1IP1LQ8NDC0 245 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 GRHL3Q8TE85 626 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 ZNF622Q969S3 477 aaKnown RBP eCLIP3.31□□□□□ -1.88
CD46-217ENST00000493796 ZNF653Q96CK0 615 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 FAM120BQ96EK7 910 aaKnown RBP3.31□□□□□ -1.88
CD46-217ENST00000493796 GMPPAQ96IJ6 420 aaPredicted RBP3.31□□□□□ -1.88
CD46-217ENST00000493796 TIGD1Q96MW7 591 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 OPRPNQ99935 248 aaPredicted RBP3.31□□□□□ -1.88
CD46-217ENST00000493796 TREX2Q9BQ50 279 aaPredicted RBP3.31□□□□□ -1.88
CD46-217ENST00000493796 TRAF4Q9BUZ4 470 aaPredicted RBP3.31□□□□□ -1.88
CD46-217ENST00000493796 VN1R1Q9GZP7 353 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 SPATC1LQ9H0A9 340 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 KCNK15Q9H427 330 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 ERVMER34-1Q9H9K5 563 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 PIH1D3Q9NQM4 214 aaKnown RBP3.31□□□□□ -1.88
CD46-217ENST00000493796 ATAD3AQ9NVI7 634 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 FLRT3Q9NZU0 649 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 TMEM181Q9P2C4 612 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 HACL1Q9UJ83 578 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 RASAL2Q9UJF2 1139 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 ZNF148Q9UQR1 794 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 ATP6V0A2Q9Y487 856 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.31□□□□□ -1.88
CD46-217ENST00000493796 OTOFQ9HC10 1997 aa3.31□□□□□ -1.88
CD46-217ENST00000493796 NOTCH3Q9UM47 2321 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 KIF16BQ96L93 1317 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 OR2A25A4D2G3 310 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 A6NCN8 305 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 HEPACAM2A8MVW5 462 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 SLCO1B7G3V0H7 640 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 ZNF197O14709 1029 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 ATP6V0E1O15342 81 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 ARHGEF9O43307 516 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 AP2A2O94973 939 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 PIGNO95427 931 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 HMBSP08397 361 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 UBTFL1P0CB47 393 aaPredicted RBP3.3□□□□□ -1.88
CD46-217ENST00000493796 VPREB1P12018 145 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 ACSL1P33121 698 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 CLK1P49759 484 aaKnown RBP3.3□□□□□ -1.88
CD46-217ENST00000493796 TAF6P49848 677 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 ARSEP51690 589 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 SIRPAP78324 504 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 MC1RQ01726 317 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 NUCB1Q02818 461 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 CREB5Q02930 508 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 GPR17Q13304 367 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 HSP90AB3PQ58FF7 597 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 MDH1BQ5I0G3 518 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 SZRD1Q7Z422 152 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 LDB1Q86U70 411 aaPredicted RBP3.3□□□□□ -1.88
CD46-217ENST00000493796 ZNF611Q8N823 705 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 PPFIBP2Q8ND30 876 aa3.3□□□□□ -1.88
CD46-217ENST00000493796 PAPD5Q8NDF8 572 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms