RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 M0R296 226 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 MAGEB2O15479 319 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 DCXO43602 365 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 TSPAN3O60637 253 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 MT-CYBP00156 380 aaPredicted RBP2.99□□□□□ -1.93
PTCD3-218ENST00000493430 ADRB2P07550 413 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 CYC1P08574 325 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 GLULP15104 373 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 CEBPBP17676 345 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 EDN2P20800 178 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 BDKRB2P30411 391 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 CORO1AP31146 461 aaKnown RBP2.99□□□□□ -1.93
PTCD3-218ENST00000493430 CHKAP35790 457 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 NT5C2P49902 561 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 SLC26A2P50443 739 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 CLCN4P51793 760 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 GRIK3Q13003 919 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 GAGE5Q13069 117 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 GAGE6Q13070 117 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 PRPF4BQ13523 1007 aaKnown RBP2.99□□□□□ -1.93
PTCD3-218ENST00000493430 TRIM29Q14134 588 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 SMC1AQ14683 1233 aaKnown RBP2.99□□□□□ -1.93
PTCD3-218ENST00000493430 PDCD2Q16342 344 aaPredicted RBP2.99□□□□□ -1.93
PTCD3-218ENST00000493430 EIF2S3LQ2VIR3 472 aaKnown RBP2.99□□□□□ -1.93
PTCD3-218ENST00000493430 ZC2HC1BQ5TFG8 222 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 METTL2BQ6P1Q9 378 aaKnown RBP2.99□□□□□ -1.93
PTCD3-218ENST00000493430 TSSK4Q6SA08 328 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 MOXD1Q6UVY6 613 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 ZNF497Q6ZNH5 498 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 ASB18Q6ZVZ8 466 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 TADA2BQ86TJ2 420 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 ZNF410Q86VK4 478 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 GPBP1Q86WP2 473 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 EFCAB13Q8IY85 973 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 RNF168Q8IYW5 571 aaPredicted RBP2.99□□□□□ -1.93
PTCD3-218ENST00000493430 MYCT1Q8N699 235 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 CNNM3Q8NE01 707 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 SUSD6Q92537 303 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 FGF14Q92915 247 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 P2RX5Q93086 422 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 SAAL1Q96ER3 474 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 METTL2AQ96IZ6 378 aaKnown RBP2.99□□□□□ -1.93
PTCD3-218ENST00000493430 COG8Q96MW5 612 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 BBS4Q96RK4 519 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 USP28Q96RU2 1077 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 MTERF1Q99551 399 aaKnown RBP2.99□□□□□ -1.93
PTCD3-218ENST00000493430 CMKLR1Q99788 373 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 FTHL17Q9BXU8 183 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 BLZF1Q9H2G9 400 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 BPIFA1Q9NP55 256 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 LRWD1Q9UFC0 647 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 FBXO2Q9UK22 296 aaPredicted RBP2.99□□□□□ -1.93
PTCD3-218ENST00000493430 TTC7AQ9ULT0 858 aaPredicted RBP2.99□□□□□ -1.93
PTCD3-218ENST00000493430 MTMR6Q9Y217 621 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 KCNK7Q9Y2U2 307 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 FAM96BQ9Y3D0 163 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 MTF2Q9Y483 593 aaPredicted RBP2.99□□□□□ -1.93
PTCD3-218ENST00000493430 LOXL2Q9Y4K0 774 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 R4GN57 208 aa2.99□□□□□ -1.93
PTCD3-218ENST00000493430 RIF1Q5UIP0 2472 aaKnown RBP2.99□□□□□ -1.93
PTCD3-218ENST00000493430 EP300Q09472 2414 aaPredicted RBP2.99□□□□□ -1.93
PTCD3-218ENST00000493430 GPR179Q6PRD1 2367 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 CLUHO75153 1309 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 PHLPP2Q6ZVD8 1323 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 SCN8AQ9UQD0 1980 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 GVINP1Q7Z2Y8 2422 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 SHISA7A6NL88 538 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 H3BQV1 296 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 K7ENM7 598 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 FAM189A1O60320 539 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 CALCAP01258 141 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 URODP06132 367 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 RB1P06400 928 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 HEXAP06865 529 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 CENPBP07199 599 aaPredicted RBP2.98□□□□□ -1.93
PTCD3-218ENST00000493430 DCNP07585 359 aaKnown RBP2.98□□□□□ -1.93
PTCD3-218ENST00000493430 PLA2G4BP0C869 781 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 PATE4P0C8F1 98 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 GCFC2P16383 781 aaKnown RBP2.98□□□□□ -1.93
PTCD3-218ENST00000493430 CYP11B2P19099 503 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 MAOAP21397 527 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 SYT1P21579 422 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 ACAT1P24752 427 aaKnown RBP2.98□□□□□ -1.93
PTCD3-218ENST00000493430 RPA1P27694 616 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 POU1F1P28069 291 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 TMOD1P28289 359 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 OR1D2P34982 312 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 MATR3P43243 847 aaKnown RBP eCLIP2.98□□□□□ -1.93
PTCD3-218ENST00000493430 CASP4P49662 377 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 ACOT2P49753 483 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 PAPOLAP51003 745 aaKnown RBP2.98□□□□□ -1.93
PTCD3-218ENST00000493430 SLC12A3P55017 1021 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 ROR1Q01973 937 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 SRSF5Q13243 272 aaKnown RBP2.98□□□□□ -1.93
PTCD3-218ENST00000493430 PLD1Q13393 1074 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 MORC3Q14149 939 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 KRT72Q14CN4 511 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 ZRSR2Q15696 482 aaKnown RBP2.98□□□□□ -1.93
PTCD3-218ENST00000493430 PSMD5Q16401 504 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 LPAL2Q16609 132 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms