RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 MCATQ8IVS2 390 aaKnown RBP13.43□□□□□ -0.26
CCM2-217ENST00000492883 GPR135Q8IZ08 494 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 DNAJC22Q8N4W6 341 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 OR1L3Q8NH93 324 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 STAG3L4Q8TBR4 150 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 KIAA1191Q96A73 305 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 PYCR2Q96C36 320 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 NXNL1Q96CM4 212 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 PARD6BQ9BYG5 372 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 SLC7A5P2Q9GIP4 190 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 EPB41L4BQ9H329 900 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 RNF112Q9ULX5 631 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 SNX7Q9UNH6 387 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 TMEM184BQ9Y519 407 aaPredicted RBP13.43□□□□□ -0.26
CCM2-217ENST00000492883 UNC13CQ8NB66 2214 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 IQANK1A0A1B0GTG1 560 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.42□□□□□ -0.26
CCM2-217ENST00000492883 E7EQ34 232 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 OR2B3O76000 313 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 TIAF1O95411 115 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 TFEBP19484 476 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 HNMTP50135 292 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 ATP1A2P50993 1020 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 ITGA1P56199 1179 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 CDKL1Q00532 357 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 IRF9Q00978 393 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 DLG1Q12959 904 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 CLN3Q13286 438 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 OR4D1Q15615 310 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 FAM83EQ2M2I3 478 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 BROXQ5VW32 411 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 KLC3Q6P597 504 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 ADGRD1Q6QNK2 874 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 C6orf15Q6UXA7 325 aaPredicted RBP13.42□□□□□ -0.26
CCM2-217ENST00000492883 ISCA2Q86U28 154 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 SPACA3Q8IXA5 215 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 CACNA2D3Q8IZS8 1091 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 NLGN4XQ8N0W4 816 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 IL22RA1Q8N6P7 574 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 GALNT6Q8NCL4 622 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 NLGN4YQ8NFZ3 816 aaPredicted RBP13.42□□□□□ -0.26
CCM2-217ENST00000492883 KCTD4Q8WVF5 259 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 EXT2Q93063 718 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 PTERQ96BW5 349 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 MTBPQ96DY7 904 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 HAUS8Q9BT25 410 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 DHRS4Q9BTZ2 278 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 SGPP1Q9BX95 441 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 SPRY4Q9C004 299 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 SPRTNQ9H040 489 aaPredicted RBP13.42□□□□□ -0.26
CCM2-217ENST00000492883 ALG9Q9H6U8 611 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 SLC6A20Q9NP91 592 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 IGSF5Q9NSI5 407 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 EURLQ9NYK6 297 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 CD274Q9NZQ7 290 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 ANKMY1Q9P2S6 941 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 FETUBQ9UGM5 382 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 PILRAQ9UKJ1 303 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 KLK4Q9Y5K2 254 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 SPEGQ15772 3267 aa13.42□□□□□ -0.26
CCM2-217ENST00000492883 PIKFYVEQ9Y2I7 2098 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 A0A087WV48 116 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 A0A0J9YVX5 310 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 H7BY64 318 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 HCRTR1O43613 425 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 KLHL2O95198 593 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 MT-ND3P03897 115 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 S100BP04271 92 aaPredicted RBP13.41□□□□□ -0.26
CCM2-217ENST00000492883 SHBGP04278 402 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 TUBBP07437 444 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 CCNYL3P0C7X3 344 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 NPPBP16860 134 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 HRH2P25021 359 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 ITPKBP27987 946 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 GCAP28676 217 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 HSD17B3P37058 310 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 GLRBP48167 497 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 GABRA4P48169 554 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 ZXDCQ2QGD7 858 aaPredicted RBP13.41□□□□□ -0.26
CCM2-217ENST00000492883 PTCHD3Q3KNS1 767 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 MANEAQ5SRI9 462 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 PRAMEF17Q5VTA0 474 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 FBXO42Q6P3S6 717 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 EMBQ6PCB8 327 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 LCTLQ6UWM7 567 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 TIPARPQ7Z3E1 657 aaKnown RBP13.41□□□□□ -0.26
CCM2-217ENST00000492883 THOC6Q86W42 341 aaKnown RBP13.41□□□□□ -0.26
CCM2-217ENST00000492883 C17orf64Q86WR6 236 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 DTX1Q86Y01 620 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 TCAIMQ8N3R3 496 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 ESX1Q8N693 406 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 OR56A3Q8NH54 315 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 HNRNPLLQ8WVV9 542 aaKnown RBP13.41□□□□□ -0.26
CCM2-217ENST00000492883 NKD1Q969G9 470 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 RHBDF1Q96CC6 855 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 CLIP3Q96DZ5 547 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 TSNARE1Q96NA8 513 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 PRAP1Q96NZ9 151 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 PLCD4Q9BRC7 762 aa13.41□□□□□ -0.26
CCM2-217ENST00000492883 WWOXQ9NZC7 414 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms