RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 LHPPQ9H008 270 aa11.91□□□□□ -0.5
COL6A1-205ENST00000492851 MRPS30Q9NP92 439 aaKnown RBP11.91□□□□□ -0.5
COL6A1-205ENST00000492851 FBXL4Q9UKA2 621 aa11.91□□□□□ -0.5
COL6A1-205ENST00000492851 A0A0J9YVX5 310 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 OR2A25A4D2G3 310 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 GOLGA8KD6RF30 607 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 GOLGA8TH3BQL2 631 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 MYO1CO00159 1063 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 SOCS6O14544 535 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 CTSVO60911 334 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 NIPSNAP2O75323 286 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 USP1O94782 785 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 EIF2S1P05198 315 aaKnown RBP11.9□□□□□ -0.5
COL6A1-205ENST00000492851 FDXRP22570 491 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 HRH2P25021 359 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 CXCR5P32302 372 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 BDKRB1P46663 353 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 OR1D4P47884 311 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 GLRBP48167 497 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 AP2B1P63010 937 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 PRDX1Q06830 199 aaKnown RBP11.9□□□□□ -0.5
COL6A1-205ENST00000492851 TRIP13Q15645 432 aaPredicted RBP11.9□□□□□ -0.5
COL6A1-205ENST00000492851 CCSMST1Q4G0I0 132 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 C4orf17Q53FE4 359 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 LRRC8EQ6NSJ5 796 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 FBXO42Q6P3S6 717 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 KIRREL2Q6UWL6 708 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 IGFL2Q6UWQ7 119 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 CAND1Q86VP6 1230 aaKnown RBP11.9□□□□□ -0.5
COL6A1-205ENST00000492851 PRR7Q8TB68 274 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 PPP4R1Q8TF05 950 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 GRK7Q8WTQ7 553 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 INPP5DQ92835 1189 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 RERGQ96A58 199 aaPredicted RBP11.9□□□□□ -0.5
COL6A1-205ENST00000492851 MIEF2Q96C03 454 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 LMF1Q96S06 567 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 WDR77Q9BQA1 342 aaPredicted RBP11.9□□□□□ -0.5
COL6A1-205ENST00000492851 CRB3Q9BUF7 120 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 EPS8L2Q9H6S3 715 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 SLC6A20Q9NP91 592 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 HS3ST3B1Q9Y662 390 aa11.9□□□□□ -0.5
COL6A1-205ENST00000492851 A0A1W2PPV9 198 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 TCRBV7S3A2A0A539 114 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 EIF3FO00303 357 aaPredicted RBP11.89□□□□□ -0.51
COL6A1-205ENST00000492851 AVILO75366 819 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 CBX6O95503 412 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 HPP00738 406 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 ZGLP1P0C6A0 271 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 MPC1LP0DKB6 136 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 EZRP15311 586 aaKnown RBP11.89□□□□□ -0.51
COL6A1-205ENST00000492851 CXCR2P25025 360 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 MCM3P25205 808 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 CLCN7P51798 805 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 PNLIPRP1P54315 467 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 EIF2S3LQ2VIR3 472 aaKnown RBP11.89□□□□□ -0.51
COL6A1-205ENST00000492851 ACSBG2Q5FVE4 666 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 B3GNTL1Q67FW5 361 aaPredicted RBP11.89□□□□□ -0.51
COL6A1-205ENST00000492851 ZNF470Q6ECI4 717 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 FRMPD2BQ6IN97 320 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 UGT3A1Q6NUS8 523 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 CENPUQ71F23 418 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 COX15Q7KZN9 410 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 RASGEF1CQ8N431 466 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 CISD2Q8N5K1 135 aaKnown RBP11.89□□□□□ -0.51
COL6A1-205ENST00000492851 OR11G2Q8NGC1 345 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 DNAJB14Q8TBM8 379 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 STT3BQ8TCJ2 826 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 ASB11Q8WXH4 323 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 CABS1Q96KC9 395 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 PLCD4Q9BRC7 762 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 SOX17Q9H6I2 414 aaPredicted RBP11.89□□□□□ -0.51
COL6A1-205ENST00000492851 LUZP4Q9P127 313 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 RUVBL2Q9Y230 463 aaKnown RBP11.89□□□□□ -0.51
COL6A1-205ENST00000492851 PPP2R2CQ9Y2T4 447 aa11.89□□□□□ -0.51
COL6A1-205ENST00000492851 RELNP78509 3460 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 PIKFYVEQ9Y2I7 2098 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 IGLV3-12A0A075B6K2 115 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 LOC105369274A0A096LPK9 316 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 LOC102723532A0A0G2JNH3 316 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 GOLGA6L10A0A0M3HER8 536 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 CYSRT1A8MQ03 144 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 ARHGEF33A8MVX0 844 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 H0YGG7 62 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 GFYI3L273 518 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 MAP2K7O14733 419 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 ANXA5P08758 320 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 MYBL2P10244 700 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 ICAM2P13598 275 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 ACPPP15309 386 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 FBLP22087 321 aaKnown RBP11.88□□□□□ -0.51
COL6A1-205ENST00000492851 PSMB5P28074 263 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 COILP38432 576 aaPredicted RBP11.88□□□□□ -0.51
COL6A1-205ENST00000492851 SKIV2L2P42285 1042 aaKnown RBP11.88□□□□□ -0.51
COL6A1-205ENST00000492851 VPS41P49754 854 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 ARF3P61204 181 aaPredicted RBP11.88□□□□□ -0.51
COL6A1-205ENST00000492851 KLC1Q07866 573 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 DSG2Q14126 1118 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 FASTKQ14296 549 aaKnown RBP11.88□□□□□ -0.51
COL6A1-205ENST00000492851 TLR1Q15399 786 aa11.88□□□□□ -0.51
COL6A1-205ENST00000492851 CYP1B1Q16678 543 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms