RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 WT1P19544 449 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 TCN2P20062 427 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 SAT1P21673 171 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 SPRP35270 261 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 TAS2R39P59534 338 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 TBPL1P62380 186 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 PRDX1Q06830 199 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 TSTA3Q13630 321 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 KBTBD12Q3ZCT8 623 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 TCTE1Q5JU00 501 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 GRTP1Q5TC63 336 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 YOD1Q5VVQ6 348 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 RHBDD2Q6NTF9 364 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 SUSD1Q6UWL2 747 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 MCATQ8IVS2 390 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 SPNS2Q8IVW8 549 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 CTAGE3PQ8IX95 158 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 SLC38A9Q8NBW4 561 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 PPFIBP2Q8ND30 876 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 PROKR1Q8TCW9 393 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 FBF1Q8TES7 1133 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 CT55Q8WUE5 264 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 ATL1Q8WXF7 558 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 DLG3Q92796 817 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 MR1Q95460 341 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 RNF31Q96EP0 1072 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 WBP1Q96G27 269 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 ZNF285Q96NJ3 590 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 CATSPER2Q96P56 530 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 C17orf62Q9BQA9 187 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 SELENOSQ9BQE4 189 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 ACAT2Q9BWD1 397 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 GPR87Q9BY21 358 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 GPAMQ9HCL2 828 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 SLC6A20Q9NP91 592 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 IRAK4Q9NWZ3 460 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 TAC3Q9UHF0 121 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 KLHL20Q9Y2M5 609 aa10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 MTO1Q9Y2Z2 717 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-206ENST00000492796 ATXN7O15265 892 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 PIAS1O75925 651 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 WISP3O95389 354 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 RAB40ALP0C0E4 278 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 EZRP15311 586 aaKnown RBP10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 STMN1P16949 149 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 AGXTP21549 392 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 F8A1P23610 371 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 HRH2P25021 359 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 ECHS1P30084 290 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 GCGRP47871 477 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 PGGT1BP53609 377 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 ARSFP54793 590 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 RPS15P62841 145 aaKnown RBP10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 RELAQ04206 551 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 CDC20Q12834 499 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 ZNF460Q14592 562 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 USP10Q14694 798 aaKnown RBP10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 ZKSCAN8Q15776 578 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 PHKG1Q16816 387 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 THEMIS2Q5TEJ8 643 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 PRAMEF17Q5VTA0 474 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 PRAMEF13Q5VWM6 474 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 ZNF385CQ66K41 422 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 ZNF425Q6IV72 752 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 AGTRAPQ6RW13 159 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 SBSNQ6UWP8 590 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 TMEM207Q6UWW9 146 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 ADAMTSL2Q86TH1 951 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 CEP97Q8IW35 865 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 IFT20Q8IY31 132 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 ZNF655Q8N720 491 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 PPM1NQ8N819 430 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 TTC29Q8NA56 475 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 IFT81Q8WYA0 676 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 TTC9Q92623 222 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 ZFYVE21Q9BQ24 234 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 PLCD4Q9BRC7 762 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 DPH7Q9BTV6 452 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 NDC1Q9BTX1 674 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 FUT8Q9BYC5 575 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 SPRTNQ9H040 489 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 TXLNGQ9NUQ3 528 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 ARL15Q9NXU5 204 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 IL17BQ9UHF5 180 aa10.22□□□□□ -0.77
CDC42SE1-206ENST00000492796 SETXQ7Z333 2677 aaKnown RBP10.21□□□□□ -0.77
CDC42SE1-206ENST00000492796 PCM1Q15154 2024 aa10.21□□□□□ -0.77
CDC42SE1-206ENST00000492796 IGKV1-8A0A0C4DH67 115 aa10.21□□□□□ -0.77
CDC42SE1-206ENST00000492796 FITM1A5D6W6 292 aa10.21□□□□□ -0.77
CDC42SE1-206ENST00000492796 C9J4A7 227 aa10.21□□□□□ -0.77
CDC42SE1-206ENST00000492796 TK2O00142 265 aa10.21□□□□□ -0.77
CDC42SE1-206ENST00000492796 CTSVO60911 334 aa10.21□□□□□ -0.77
CDC42SE1-206ENST00000492796 CD63P08962 238 aa10.21□□□□□ -0.77
CDC42SE1-206ENST00000492796 PTPN4P29074 926 aa10.21□□□□□ -0.77
CDC42SE1-206ENST00000492796 CDKL1Q00532 357 aa10.21□□□□□ -0.77
CDC42SE1-206ENST00000492796 GRM7Q14831 915 aa10.21□□□□□ -0.77
CDC42SE1-206ENST00000492796 PPP1R3AQ16821 1122 aa10.21□□□□□ -0.77
CDC42SE1-206ENST00000492796 TAF1BQ53T94 588 aaPredicted RBP10.21□□□□□ -0.77
CDC42SE1-206ENST00000492796 CAPN13Q6MZZ7 669 aaPredicted RBP10.21□□□□□ -0.77
CDC42SE1-206ENST00000492796 FAM199XQ6PEV8 388 aaPredicted RBP10.21□□□□□ -0.77
CDC42SE1-206ENST00000492796 FAM198BQ6UWH4 519 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms