RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 HSPA14Q0VDF9 509 aa12.58□□□□□ -0.4
USF1-206ENST00000491629 FAAH2Q6GMR7 532 aa12.58□□□□□ -0.4
USF1-206ENST00000491629 HIBCHQ6NVY1 386 aaPredicted RBP12.58□□□□□ -0.4
USF1-206ENST00000491629 FBXO42Q6P3S6 717 aa12.58□□□□□ -0.4
USF1-206ENST00000491629 DARS2Q6PI48 645 aaKnown RBP12.58□□□□□ -0.4
USF1-206ENST00000491629 XKRXQ6PP77 449 aa12.58□□□□□ -0.4
USF1-206ENST00000491629 ZNF534Q76KX8 674 aa12.58□□□□□ -0.4
USF1-206ENST00000491629 CDKL3Q8IVW4 592 aaPredicted RBP12.58□□□□□ -0.4
USF1-206ENST00000491629 AMER3Q8N944 861 aa12.58□□□□□ -0.4
USF1-206ENST00000491629 DNAJB8Q8NHS0 232 aa12.58□□□□□ -0.4
USF1-206ENST00000491629 ZUFSPQ96AP4 578 aa12.58□□□□□ -0.4
USF1-206ENST00000491629 CCDC42Q96M95 316 aa12.58□□□□□ -0.4
USF1-206ENST00000491629 RNF32Q9H0A6 362 aa12.58□□□□□ -0.4
USF1-206ENST00000491629 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.58□□□□□ -0.4
USF1-206ENST00000491629 SLC2A6Q9UGQ3 507 aa12.58□□□□□ -0.4
USF1-206ENST00000491629 ZNF835Q9Y2P0 537 aa12.58□□□□□ -0.4
USF1-206ENST00000491629 PRRC2AP48634 2157 aaKnown RBP12.57□□□□□ -0.4
USF1-206ENST00000491629 DNAJC13O75165 2243 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 TARM1B6A8C7 271 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 GOLGA6L22H0YM25 854 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 SRPX2O60687 465 aaPredicted RBP12.57□□□□□ -0.4
USF1-206ENST00000491629 SLC19A2O60779 497 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 MFAP3LO75121 409 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 RASAL1O95294 804 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 OR56A5P0C7T3 313 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 ST13P50502 369 aaKnown RBP12.57□□□□□ -0.4
USF1-206ENST00000491629 OCA2Q04671 838 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 PRTGQ2VWP7 1150 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 PRMT9Q6P2P2 845 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 CNSTQ6PJW8 725 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 RNF44Q7L0R7 432 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 DCUN1D3Q8IWE4 304 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 ARHGEF39Q8N4T4 335 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 OR2A1Q8NGT9 310 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 SLC22A18Q96BI1 424 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 POM121Q96HA1 1249 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 VPS50Q96JG6 964 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 IMMP1LQ96LU5 166 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 ZNF778Q96MU6 729 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 MIPEPQ99797 713 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 R3HDM2Q9Y2K5 976 aaKnown RBP12.57□□□□□ -0.4
USF1-206ENST00000491629 NFS1Q9Y697 457 aa12.57□□□□□ -0.4
USF1-206ENST00000491629 HRNRQ86YZ3 2850 aaPredicted RBP12.57□□□□□ -0.4
USF1-206ENST00000491629 ZNF407Q9C0G0 2248 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 LOC102723996A0A087X1L8 192 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 MACROD2A1Z1Q3 448 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 PRAMEF2O60811 474 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 SLCO2B1O94956 709 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 GOT2P00505 430 aaKnown RBP12.56□□□□□ -0.4
USF1-206ENST00000491629 CRYABP02511 175 aaKnown RBP12.56□□□□□ -0.4
USF1-206ENST00000491629 AGAP20933 346 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 FBLP22087 321 aaKnown RBP12.56□□□□□ -0.4
USF1-206ENST00000491629 FDXRP22570 491 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 AOAHP28039 575 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 SSTR2P30874 369 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 BDKRB1P46663 353 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 EMP2P54851 167 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 GDF10P55107 478 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 COPS2P61201 443 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 SYT16Q17RD7 645 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.56□□□□□ -0.4
USF1-206ENST00000491629 C11orf63Q6NUN7 778 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 MTFR2Q6P444 385 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 TMEM205Q6UW68 189 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 UNC5DQ6UXZ4 953 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 CDH24Q86UP0 819 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 CHERPQ8IWX8 916 aaKnown RBP12.56□□□□□ -0.4
USF1-206ENST00000491629 KRT222Q8N1A0 295 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 OR2L3Q8NG85 312 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 HDAC10Q969S8 669 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 MTFMTQ96DP5 389 aaKnown RBP12.56□□□□□ -0.4
USF1-206ENST00000491629 HES7Q9BYE0 225 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 OSBPL8Q9BZF1 889 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 ZNF700Q9H0M5 742 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 INTS7Q9NVH2 962 aaKnown RBP12.56□□□□□ -0.4
USF1-206ENST00000491629 RUVBL2Q9Y230 463 aaKnown RBP12.56□□□□□ -0.4
USF1-206ENST00000491629 EFR3BQ9Y2G0 817 aa12.56□□□□□ -0.4
USF1-206ENST00000491629 PHF3Q92576 2039 aaKnown RBP12.55□□□□□ -0.4
USF1-206ENST00000491629 A0A0U1RQJ8 604 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 OR2A25A4D2G3 310 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 OR5H15A6NDH6 313 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 H0YGG7 62 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 FOXS1O43638 330 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 KDM1AO60341 852 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 WFS1O76024 890 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 CLDN14O95500 239 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 EIF2S1P05198 315 aaKnown RBP12.55□□□□□ -0.4
USF1-206ENST00000491629 CTNNA1P35221 906 aaKnown RBP12.55□□□□□ -0.4
USF1-206ENST00000491629 PTPN7P35236 360 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 SLC26A3P40879 764 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 ARF3P61204 181 aaPredicted RBP12.55□□□□□ -0.4
USF1-206ENST00000491629 TPM4P67936 248 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 DSG2Q14126 1118 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 FASTKQ14296 549 aaKnown RBP12.55□□□□□ -0.4
USF1-206ENST00000491629 PARP6Q2NL67 630 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 HKDC1Q2TB90 917 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 CCDC181Q5TID7 509 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 Q6ZPB1 254 aaPredicted RBP12.55□□□□□ -0.4
USF1-206ENST00000491629 RIPOR1Q6ZS17 1223 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 NEK10Q6ZWH5 1172 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms