RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 MUM1Q2TAK8 710 aa18.85■□□□□ 0.61
SREBF1-216ENST00000490796 FRMPD2BQ6IN97 320 aa18.85■□□□□ 0.61
SREBF1-216ENST00000490796 PRMT9Q6P2P2 845 aa18.85■□□□□ 0.61
SREBF1-216ENST00000490796 KIRREL2Q6UWL6 708 aa18.85■□□□□ 0.61
SREBF1-216ENST00000490796 Q6ZS92 163 aa18.85■□□□□ 0.61
SREBF1-216ENST00000490796 TMEM151BQ8IW70 566 aa18.85■□□□□ 0.61
SREBF1-216ENST00000490796 PRSS58Q8IYP2 241 aa18.85■□□□□ 0.61
SREBF1-216ENST00000490796 TRIM58Q8NG06 486 aa18.85■□□□□ 0.61
SREBF1-216ENST00000490796 OR9A1PQ8NGU1 263 aa18.85■□□□□ 0.61
SREBF1-216ENST00000490796 LPGAT1Q92604 370 aa18.85■□□□□ 0.61
SREBF1-216ENST00000490796 MIEF2Q96C03 454 aa18.85■□□□□ 0.61
SREBF1-216ENST00000490796 CABS1Q96KC9 395 aa18.85■□□□□ 0.61
SREBF1-216ENST00000490796 BIRC8Q96P09 236 aa18.85■□□□□ 0.61
SREBF1-216ENST00000490796 ZFYVE21Q9BQ24 234 aa18.85■□□□□ 0.61
SREBF1-216ENST00000490796 DPH7Q9BTV6 452 aa18.85■□□□□ 0.61
SREBF1-216ENST00000490796 YIPF2Q9BWQ6 316 aa18.85■□□□□ 0.61
SREBF1-216ENST00000490796 LHPPQ9H008 270 aa18.85■□□□□ 0.61
SREBF1-216ENST00000490796 UTP6Q9NYH9 597 aaKnown RBP18.85■□□□□ 0.61
SREBF1-216ENST00000490796 HS3ST3B1Q9Y662 390 aa18.85■□□□□ 0.61
SREBF1-216ENST00000490796 KRT87PA6NCN2 255 aa18.84■□□□□ 0.61
SREBF1-216ENST00000490796 ZNF839A8K0R7 811 aa18.84■□□□□ 0.61
SREBF1-216ENST00000490796 CATP04040 527 aaKnown RBP18.84■□□□□ 0.61
SREBF1-216ENST00000490796 FBLP22087 321 aaKnown RBP18.84■□□□□ 0.61
SREBF1-216ENST00000490796 TRIP13Q15645 432 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-216ENST00000490796 HIF1AQ16665 826 aa18.84■□□□□ 0.61
SREBF1-216ENST00000490796 TYSND1Q2T9J0 566 aa18.84■□□□□ 0.61
SREBF1-216ENST00000490796 TTLL9Q3SXZ7 439 aa18.84■□□□□ 0.61
SREBF1-216ENST00000490796 HIST2H2BCQ6DN03 193 aa18.84■□□□□ 0.61
SREBF1-216ENST00000490796 KIAA0930Q6ICG6 404 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-216ENST00000490796 OR2A1Q8NGT9 310 aa18.84■□□□□ 0.61
SREBF1-216ENST00000490796 DNAJB14Q8TBM8 379 aa18.84■□□□□ 0.61
SREBF1-216ENST00000490796 COG1Q8WTW3 980 aa18.84■□□□□ 0.61
SREBF1-216ENST00000490796 SMPDL3AQ92484 453 aa18.84■□□□□ 0.61
SREBF1-216ENST00000490796 CNDP1Q96KN2 507 aa18.84■□□□□ 0.61
SREBF1-216ENST00000490796 CCDC68Q9H2F9 335 aa18.84■□□□□ 0.61
SREBF1-216ENST00000490796 ZBTB20Q9HC78 741 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-216ENST00000490796 MRPS30Q9NP92 439 aaKnown RBP18.84■□□□□ 0.61
SREBF1-216ENST00000490796 ZNF282Q9UDV7 671 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-216ENST00000490796 CDC14AQ9UNH5 594 aa18.84■□□□□ 0.61
SREBF1-216ENST00000490796 KLK4Q9Y5K2 254 aa18.84■□□□□ 0.61
SREBF1-216ENST00000490796 MDC1Q14676 2089 aaKnown RBP18.83■□□□□ 0.61
SREBF1-216ENST00000490796 CTAGE9A4FU28 777 aa18.83■□□□□ 0.6
SREBF1-216ENST00000490796 MAP2K7O14733 419 aa18.83■□□□□ 0.6
SREBF1-216ENST00000490796 PRPF4O43172 522 aaKnown RBP eCLIP18.83■□□□□ 0.64e-7■■■■□ 20.3
SREBF1-216ENST00000490796 CCNDBP1O95273 360 aa18.83■□□□□ 0.6
SREBF1-216ENST00000490796 CBX6O95503 412 aa18.83■□□□□ 0.6
SREBF1-216ENST00000490796 UQCRHP07919 91 aa18.83■□□□□ 0.6
SREBF1-216ENST00000490796 PKMP14618 531 aaKnown RBP18.83■□□□□ 0.6
SREBF1-216ENST00000490796 OGNP20774 298 aaKnown RBP18.83■□□□□ 0.6
SREBF1-216ENST00000490796 ARNTP27540 789 aa18.83■□□□□ 0.6
SREBF1-216ENST00000490796 HSD17B2P37059 387 aa18.83■□□□□ 0.6
SREBF1-216ENST00000490796 GPS1Q13098 491 aa18.83■□□□□ 0.6
SREBF1-216ENST00000490796 THOC5Q13769 683 aaKnown RBP18.83■□□□□ 0.6
SREBF1-216ENST00000490796 FASTKQ14296 549 aaKnown RBP18.83■□□□□ 0.6
SREBF1-216ENST00000490796 NEPROQ6NW34 567 aa18.83■□□□□ 0.6
SREBF1-216ENST00000490796 RNF44Q7L0R7 432 aa18.83■□□□□ 0.6
SREBF1-216ENST00000490796 CUZD1Q86UP6 607 aa18.83■□□□□ 0.6
SREBF1-216ENST00000490796 STT3BQ8TCJ2 826 aa18.83■□□□□ 0.6
SREBF1-216ENST00000490796 PPP4R1Q8TF05 950 aa18.83■□□□□ 0.6
SREBF1-216ENST00000490796 THOC3Q96J01 351 aaKnown RBP18.83■□□□□ 0.6
SREBF1-216ENST00000490796 C5orf34Q96MH7 638 aa18.83■□□□□ 0.6
SREBF1-216ENST00000490796 ENAMQ9NRM1 1142 aa18.83■□□□□ 0.6
SREBF1-216ENST00000490796 C3orf18Q9UK00 162 aa18.83■□□□□ 0.6
SREBF1-216ENST00000490796 PCDHGA10Q9Y5H3 936 aa18.83■□□□□ 0.6
SREBF1-216ENST00000490796 UNC79Q9P2D8 2635 aa18.83■□□□□ 0.6
SREBF1-216ENST00000490796 LOC105369274A0A096LPK9 316 aa18.82■□□□□ 0.6
SREBF1-216ENST00000490796 LOC102723532A0A0G2JNH3 316 aa18.82■□□□□ 0.6
SREBF1-216ENST00000490796 TCRBV7S3A2A0A539 114 aa18.82■□□□□ 0.6
SREBF1-216ENST00000490796 VSTM2BA6NLU5 285 aa18.82■□□□□ 0.6
SREBF1-216ENST00000490796 NRDCO43847 1150 aa18.82■□□□□ 0.6
SREBF1-216ENST00000490796 PHF2O75151 1096 aa18.82■□□□□ 0.6
SREBF1-216ENST00000490796 MATN4O95460 622 aa18.82■□□□□ 0.6
SREBF1-216ENST00000490796 ACPPP15309 386 aa18.82■□□□□ 0.6
SREBF1-216ENST00000490796 CXCR2P25025 360 aa18.82■□□□□ 0.6
SREBF1-216ENST00000490796 CXCR5P32302 372 aa18.82■□□□□ 0.6
SREBF1-216ENST00000490796 ADARP55265 1226 aaKnown RBP18.82■□□□□ 0.6
SREBF1-216ENST00000490796 KLC1Q07866 573 aa18.82■□□□□ 0.6
SREBF1-216ENST00000490796 ARHGAP19Q14CB8 494 aa18.82■□□□□ 0.6
SREBF1-216ENST00000490796 KLHL38Q2WGJ6 581 aa18.82■□□□□ 0.6
SREBF1-216ENST00000490796 ACSBG2Q5FVE4 666 aa18.82■□□□□ 0.6
SREBF1-216ENST00000490796 ARMC3Q5W041 872 aa18.82■□□□□ 0.6
SREBF1-216ENST00000490796 SUSD1Q6UWL2 747 aa18.82■□□□□ 0.6
SREBF1-216ENST00000490796 OR4N4Q8N0Y3 316 aa18.82■□□□□ 0.6
SREBF1-216ENST00000490796 OR11G2Q8NGC1 345 aa18.82■□□□□ 0.6
SREBF1-216ENST00000490796 INPP5DQ92835 1189 aa18.82■□□□□ 0.6
SREBF1-216ENST00000490796 RERGQ96A58 199 aaPredicted RBP18.82■□□□□ 0.6
SREBF1-216ENST00000490796 INTS10Q9NVR2 710 aaKnown RBP18.82■□□□□ 0.6
SREBF1-216ENST00000490796 SLC5A6Q9Y289 635 aa18.82■□□□□ 0.6
SREBF1-216ENST00000490796 DOPEY1Q5JWR5 2465 aa18.82■□□□□ 0.6
SREBF1-216ENST00000490796 A0A1W2PPV9 198 aa18.81■□□□□ 0.6
SREBF1-216ENST00000490796 MAGEB16A2A368 324 aa18.81■□□□□ 0.6
SREBF1-216ENST00000490796 OR2A25A4D2G3 310 aa18.81■□□□□ 0.6
SREBF1-216ENST00000490796 ARHGEF33A8MVX0 844 aa18.81■□□□□ 0.6
SREBF1-216ENST00000490796 H0YGG7 62 aa18.81■□□□□ 0.6
SREBF1-216ENST00000490796 USP1O94782 785 aa18.81■□□□□ 0.6
SREBF1-216ENST00000490796 SYF2O95926 243 aaKnown RBP18.81■□□□□ 0.6
SREBF1-216ENST00000490796 ZGLP1P0C6A0 271 aa18.81■□□□□ 0.6
SREBF1-216ENST00000490796 ARF3P61204 181 aaPredicted RBP18.81■□□□□ 0.6
SREBF1-216ENST00000490796 CDC16Q13042 620 aa18.81■□□□□ 0.6
SREBF1-216ENST00000490796 DHX34Q14147 1143 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms