RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ANKRD12Q6UB98 2062 aa30.03■■■□□ 2.4
LDB1-204ENST00000490751 OR2A25A4D2G3 310 aa30.02■■■□□ 2.4
LDB1-204ENST00000490751 FITM1A5D6W6 292 aa30.02■■■□□ 2.4
LDB1-204ENST00000490751 ZNF839A8K0R7 811 aa30.02■■■□□ 2.4
LDB1-204ENST00000490751 CEACAM4O75871 244 aa30.02■■■□□ 2.4
LDB1-204ENST00000490751 SLC16A8O95907 504 aa30.02■■■□□ 2.4
LDB1-204ENST00000490751 SYF2O95926 243 aaKnown RBP30.02■■■□□ 2.4
LDB1-204ENST00000490751 HSD17B2P37059 387 aa30.02■■■□□ 2.4
LDB1-204ENST00000490751 DR1Q01658 176 aa30.02■■■□□ 2.4
LDB1-204ENST00000490751 WASHC2DQ5SRD0 308 aa30.02■■■□□ 2.4
LDB1-204ENST00000490751 CYHR1Q6ZMK1 362 aa30.02■■■□□ 2.4
LDB1-204ENST00000490751 SYDE1Q6ZW31 735 aaPredicted RBP30.02■■■□□ 2.4
LDB1-204ENST00000490751 PIWIL4Q7Z3Z4 852 aaKnown RBP30.02■■■□□ 2.4
LDB1-204ENST00000490751 IGDCC3Q8IVU1 814 aa30.02■■■□□ 2.4
LDB1-204ENST00000490751 TMEM151BQ8IW70 566 aa30.02■■■□□ 2.4
LDB1-204ENST00000490751 PPFIBP2Q8ND30 876 aa30.02■■■□□ 2.4
LDB1-204ENST00000490751 GABPB2Q8TAK5 448 aaPredicted RBP30.02■■■□□ 2.4
LDB1-204ENST00000490751 RUNDC3BQ96NL0 473 aa30.02■■■□□ 2.4
LDB1-204ENST00000490751 IP6K3Q96PC2 410 aa30.02■■■□□ 2.4
LDB1-204ENST00000490751 NDNQ99608 321 aa30.02■■■□□ 2.4
LDB1-204ENST00000490751 MRPS30Q9NP92 439 aaKnown RBP30.02■■■□□ 2.4
LDB1-204ENST00000490751 GFYI3L273 518 aa30.01■■■□□ 2.39
LDB1-204ENST00000490751 MORF4L2Q15014 288 aa30.01■■■□□ 2.39
LDB1-204ENST00000490751 FDCSPQ8NFU4 85 aa30.01■■■□□ 2.39
LDB1-204ENST00000490751 ZNF480Q8WV37 535 aa30.01■■■□□ 2.39
LDB1-204ENST00000490751 ZDHHC19Q8WVZ1 309 aaPredicted RBP30.01■■■□□ 2.39
LDB1-204ENST00000490751 FKBP10Q96AY3 582 aa30.01■■■□□ 2.39
LDB1-204ENST00000490751 PTERQ96BW5 349 aa30.01■■■□□ 2.39
LDB1-204ENST00000490751 ZFYVE21Q9BQ24 234 aa30.01■■■□□ 2.39
LDB1-204ENST00000490751 TRIM51Q9BSJ1 452 aa30.01■■■□□ 2.39
LDB1-204ENST00000490751 TAC3Q9UHF0 121 aa30.01■■■□□ 2.39
LDB1-204ENST00000490751 TRMT6Q9UJA5 497 aaKnown RBP30.01■■■□□ 2.39
LDB1-204ENST00000490751 LOC105369274A0A096LPK9 316 aa30■■■□□ 2.39
LDB1-204ENST00000490751 LOC102723532A0A0G2JNH3 316 aa30■■■□□ 2.39
LDB1-204ENST00000490751 A6NL46 340 aa30■■■□□ 2.39
LDB1-204ENST00000490751 UMODP07911 640 aa30■■■□□ 2.39
LDB1-204ENST00000490751 PIM1P11309 404 aaPredicted RBP30■■■□□ 2.39
LDB1-204ENST00000490751 FAM214AQ32MH5 1076 aa30■■■□□ 2.39
LDB1-204ENST00000490751 OR4N4Q8N0Y3 316 aa30■■■□□ 2.39
LDB1-204ENST00000490751 PDIK1LQ8N165 341 aa30■■■□□ 2.39
LDB1-204ENST00000490751 METTL27Q8N6F8 245 aaPredicted RBP30■■■□□ 2.39
LDB1-204ENST00000490751 CERS2Q96G23 380 aa30■■■□□ 2.39
LDB1-204ENST00000490751 PWWP2AQ96N64 755 aa30■■■□□ 2.39
LDB1-204ENST00000490751 ANKMY1Q9P2S6 941 aa30■■■□□ 2.39
LDB1-204ENST00000490751 ZC3H7BQ9UGR2 993 aaKnown RBP30■■■□□ 2.39
LDB1-204ENST00000490751 HEATR5BQ9P2D3 2071 aa30■■■□□ 2.39
LDB1-204ENST00000490751 E7ENX8 843 aa29.99■■■□□ 2.39
LDB1-204ENST00000490751 EIF3FO00303 357 aaPredicted RBP29.99■■■□□ 2.39
LDB1-204ENST00000490751 ZBTB14O43829 449 aa29.99■■■□□ 2.39
LDB1-204ENST00000490751 ONECUT2O95948 504 aa29.99■■■□□ 2.39
LDB1-204ENST00000490751 EIF2S1P05198 315 aaKnown RBP29.99■■■□□ 2.39
LDB1-204ENST00000490751 GABRB3P28472 473 aa29.99■■■□□ 2.39
LDB1-204ENST00000490751 CARSP49589 748 aaKnown RBP29.99■■■□□ 2.39
LDB1-204ENST00000490751 TAP2Q03519 686 aa29.99■■■□□ 2.39
LDB1-204ENST00000490751 HP1BP3Q5SSJ5 553 aaPredicted RBP29.99■■■□□ 2.39
LDB1-204ENST00000490751 ICE2Q659A1 982 aa29.99■■■□□ 2.39
LDB1-204ENST00000490751 UGT3A1Q6NUS8 523 aa29.99■■■□□ 2.39
LDB1-204ENST00000490751 UBE2R2Q712K3 238 aaPredicted RBP29.99■■■□□ 2.39
LDB1-204ENST00000490751 COX15Q7KZN9 410 aa29.99■■■□□ 2.39
LDB1-204ENST00000490751 OVCH1Q7RTY7 1134 aa29.99■■■□□ 2.39
LDB1-204ENST00000490751 CNTN4Q8IWV2 1026 aa29.99■■■□□ 2.39
LDB1-204ENST00000490751 DTWD1Q8N5C7 304 aa29.99■■■□□ 2.39
LDB1-204ENST00000490751 PLCD4Q9BRC7 762 aa29.99■■■□□ 2.39
LDB1-204ENST00000490751 NUDT9Q9BW91 350 aa29.99■■■□□ 2.39
LDB1-204ENST00000490751 G3BP2Q9UN86 482 aaKnown RBP29.99■■■□□ 2.39
LDB1-204ENST00000490751 CHMP2BQ9UQN3 213 aa29.99■■■□□ 2.39
LDB1-204ENST00000490751 NUP210LQ5VU65 1888 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 IGKV1-8A0A0C4DH67 115 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 HYKKA2RU49 373 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 CCDC188H7C350 402 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 PEX12O00623 359 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 TTI1O43156 1089 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 CCNDBP1O95273 360 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 ALBP02768 609 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 ELK3P41970 407 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 SKIV2L2P42285 1042 aaKnown RBP29.98■■■□□ 2.39
LDB1-204ENST00000490751 OR1D4P47884 311 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 FOXK1P85037 733 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 PRDX1Q06830 199 aaKnown RBP29.98■■■□□ 2.39
LDB1-204ENST00000490751 IGFBP7Q16270 282 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 RBM20Q5T481 1227 aaKnown RBP29.98■■■□□ 2.39
LDB1-204ENST00000490751 FBXO42Q6P3S6 717 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 PPP1R32Q7Z5V6 425 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 PAQR7Q86WK9 346 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 CFAP36Q96G28 342 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 FER1L6-AS2Q96M78 137 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 PLAC1Q9HBJ0 212 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 ABCF3Q9NUQ8 709 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 P4HTMQ9NXG6 502 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 SLC17A6Q9P2U8 582 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 ZNF451Q9Y4E5 1061 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 PCDHGB7Q9Y5F8 929 aa29.98■■■□□ 2.39
LDB1-204ENST00000490751 SMAPO00193 183 aa29.97■■■□□ 2.39
LDB1-204ENST00000490751 MED26O95402 600 aa29.97■■■□□ 2.39
LDB1-204ENST00000490751 PAFAH1B1P43034 410 aa29.97■■■□□ 2.39
LDB1-204ENST00000490751 TIAL1Q01085 375 aaKnown RBP eCLIP29.97■■■□□ 2.39
LDB1-204ENST00000490751 LRRC8EQ6NSJ5 796 aa29.97■■■□□ 2.39
LDB1-204ENST00000490751 HIBCHQ6NVY1 386 aaPredicted RBP29.97■■■□□ 2.39
LDB1-204ENST00000490751 KIAA0408Q6ZU52 694 aa29.97■■■□□ 2.39
LDB1-204ENST00000490751 WDR54Q9H977 334 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms