RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 FTH1P02794 183 aa15.2■□□□□ 0.02
PCCB-218ENST00000490504 HOXB3P14651 431 aaPredicted RBP15.2■□□□□ 0.02
PCCB-218ENST00000490504 CCKBRP32239 447 aa15.2■□□□□ 0.02
PCCB-218ENST00000490504 CCR7P32248 378 aa15.2■□□□□ 0.02
PCCB-218ENST00000490504 TLE3Q04726 772 aa15.2■□□□□ 0.02
PCCB-218ENST00000490504 ZFP36L1Q07352 338 aaKnown RBP15.2■□□□□ 0.02
PCCB-218ENST00000490504 LCP2Q13094 533 aa15.2■□□□□ 0.02
PCCB-218ENST00000490504 LRP8Q14114 963 aa15.2■□□□□ 0.02
PCCB-218ENST00000490504 GBX1Q14549 363 aa15.2■□□□□ 0.02
PCCB-218ENST00000490504 PDCD2Q16342 344 aaPredicted RBP15.2■□□□□ 0.02
PCCB-218ENST00000490504 PPP1R3AQ16821 1122 aa15.2■□□□□ 0.02
PCCB-218ENST00000490504 KHDC1Q4VXA5 237 aaKnown RBP15.2■□□□□ 0.02
PCCB-218ENST00000490504 PLEKHS1Q5SXH7 462 aa15.2■□□□□ 0.02
PCCB-218ENST00000490504 ASRGL1Q7L266 308 aa15.2■□□□□ 0.02
PCCB-218ENST00000490504 CHST15Q7LFX5 561 aaPredicted RBP15.2■□□□□ 0.02
PCCB-218ENST00000490504 PHYKPLQ8IUZ5 450 aa15.2■□□□□ 0.02
PCCB-218ENST00000490504 ZNF483Q8TF39 744 aaPredicted RBP15.2■□□□□ 0.02
PCCB-218ENST00000490504 PTCD3Q96EY7 689 aaKnown RBP15.2■□□□□ 0.02
PCCB-218ENST00000490504 TMEM74Q96NL1 305 aa15.2■□□□□ 0.02
PCCB-218ENST00000490504 CCDC28BQ9BUN5 200 aa15.2■□□□□ 0.02
PCCB-218ENST00000490504 ATXN10Q9UBB4 475 aa15.2■□□□□ 0.02
PCCB-218ENST00000490504 LNPEPQ9UIQ6 1025 aa15.2■□□□□ 0.02
PCCB-218ENST00000490504 PRDM4Q9UKN5 801 aa15.2■□□□□ 0.02
PCCB-218ENST00000490504 TRIM33Q9UPN9 1127 aa15.2■□□□□ 0.02
PCCB-218ENST00000490504 ADAMTS20P59510 1910 aa15.2■□□□□ 0.02
PCCB-218ENST00000490504 CDRT15L2A8MXV6 281 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 H0YHG0 523 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 TMX2-CTNND1H3BSU7 103 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 PLD2O14939 933 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 HGFP14210 728 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 CALB2P22676 271 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 CDH13P55290 713 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 CLCQ05315 142 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 UBAP2LQ14157 1087 aaKnown RBP15.19■□□□□ 0.02
PCCB-218ENST00000490504 NR1D2Q14995 579 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 CYHR1Q6ZMK1 362 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 USP53Q70EK8 1073 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 RAB11FIP2Q7L804 512 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 PDPRQ8NCN5 879 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 OR52B2Q96RD2 323 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 STRADBQ9C0K7 418 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 OR2AG1Q9H205 316 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 LRMDAQ9H2I8 198 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 SEMA6CQ9H3T2 930 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 RDH14Q9HBH5 336 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 TNFRSF12AQ9NP84 129 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 UTP6Q9NYH9 597 aaKnown RBP15.19■□□□□ 0.02
PCCB-218ENST00000490504 PCTPQ9UKL6 214 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 KCNK6Q9Y257 313 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 TRAF6Q9Y4K3 522 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 CACNA1GO43497 2377 aa15.19■□□□□ 0.02
PCCB-218ENST00000490504 SGTAO43765 313 aa15.18■□□□□ 0.02
PCCB-218ENST00000490504 NUAK1O60285 661 aa15.18■□□□□ 0.02
PCCB-218ENST00000490504 CDK14O94921 469 aa15.18■□□□□ 0.02
PCCB-218ENST00000490504 MPC1LP0DKB6 136 aa15.18■□□□□ 0.02
PCCB-218ENST00000490504 ACP5P13686 325 aa15.18■□□□□ 0.02
PCCB-218ENST00000490504 ZNF8P17098 575 aaPredicted RBP15.18■□□□□ 0.02
PCCB-218ENST00000490504 TSPAN8P19075 237 aa15.18■□□□□ 0.02
PCCB-218ENST00000490504 NCF2P19878 526 aaPredicted RBP15.18■□□□□ 0.02
PCCB-218ENST00000490504 CD1CP29017 333 aa15.18■□□□□ 0.02
PCCB-218ENST00000490504 EPHA3P29320 983 aa15.18■□□□□ 0.02
PCCB-218ENST00000490504 AGTR2P50052 363 aa15.18■□□□□ 0.02
PCCB-218ENST00000490504 BIRC2Q13490 618 aa15.18■□□□□ 0.02
PCCB-218ENST00000490504 TREML1Q86YW5 311 aa15.18■□□□□ 0.02
PCCB-218ENST00000490504 SLITRK4Q8IW52 837 aa15.18■□□□□ 0.02
PCCB-218ENST00000490504 TRPC4APQ8TEL6 797 aa15.18■□□□□ 0.02
PCCB-218ENST00000490504 MAELQ96JY0 434 aaKnown RBP15.18■□□□□ 0.02
PCCB-218ENST00000490504 NSUN5Q96P11 429 aaKnown RBP15.18■□□□□ 0.02
PCCB-218ENST00000490504 PRORYQ9H606 182 aa15.18■□□□□ 0.02
PCCB-218ENST00000490504 WDR55Q9H6Y2 383 aaPredicted RBP15.18■□□□□ 0.02
PCCB-218ENST00000490504 RMI1Q9H9A7 625 aa15.18■□□□□ 0.02
PCCB-218ENST00000490504 MID1IP1Q9NPA3 183 aa15.18■□□□□ 0.02
PCCB-218ENST00000490504 TBC1D29Q9UFV1 150 aa15.18■□□□□ 0.02
PCCB-218ENST00000490504 ADAMTS6Q9UKP5 1117 aa15.18■□□□□ 0.02
PCCB-218ENST00000490504 FIS1Q9Y3D6 152 aa15.18■□□□□ 0.02
PCCB-218ENST00000490504 TNPO3Q9Y5L0 923 aaKnown RBP15.18■□□□□ 0.02
PCCB-218ENST00000490504 LOC400499M0QZD8 3231 aa15.18■□□□□ 0.02
PCCB-218ENST00000490504 GOLGA8QA0A0J9YX86 632 aa15.17■□□□□ 0.02
PCCB-218ENST00000490504 GOLGA8OA6NCC3 632 aa15.17■□□□□ 0.02
PCCB-218ENST00000490504 E9PBE3 544 aa15.17■□□□□ 0.02
PCCB-218ENST00000490504 GOLGA8NF8WBI6 632 aa15.17■□□□□ 0.02
PCCB-218ENST00000490504 SDHDO14521 159 aa15.17■□□□□ 0.02
PCCB-218ENST00000490504 KLHL41O60662 606 aa15.17■□□□□ 0.02
PCCB-218ENST00000490504 MLYCDO95822 493 aa15.17■□□□□ 0.02
PCCB-218ENST00000490504 JUNP05412 331 aaKnown RBP15.17■□□□□ 0.02
PCCB-218ENST00000490504 FGF4P08620 206 aa15.17■□□□□ 0.02
PCCB-218ENST00000490504 ESRRAP11474 423 aaPredicted RBP15.17■□□□□ 0.02
PCCB-218ENST00000490504 NQO1P15559 274 aaKnown RBP15.17■□□□□ 0.02
PCCB-218ENST00000490504 VCLP18206 1134 aa15.17■□□□□ 0.02
PCCB-218ENST00000490504 GPR3P46089 330 aa15.17■□□□□ 0.02
PCCB-218ENST00000490504 SH3BP2P78314 561 aa15.17■□□□□ 0.02
PCCB-218ENST00000490504 BTKQ06187 659 aa15.17■□□□□ 0.02
PCCB-218ENST00000490504 TMEM115Q12893 351 aaPredicted RBP15.17■□□□□ 0.02
PCCB-218ENST00000490504 EIF3IQ13347 325 aaKnown RBP15.17■□□□□ 0.02
PCCB-218ENST00000490504 PCBP2Q15366 365 aaKnown RBP eCLIP15.17■□□□□ 0.02
PCCB-218ENST00000490504 LSM12Q3MHD2 195 aaKnown RBP15.17■□□□□ 0.02
PCCB-218ENST00000490504 NKAIN2Q5VXU1 208 aa15.17■□□□□ 0.02
PCCB-218ENST00000490504 ZNF574Q6ZN55 896 aaPredicted RBP15.17■□□□□ 0.02
PCCB-218ENST00000490504 NEK10Q6ZWH5 1172 aa15.17■□□□□ 0.02
PCCB-218ENST00000490504 ADGRG6Q86SQ4 1221 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms