RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 PCM1Q15154 2024 aa16.98■□□□□ 0.31
YIPF3-208ENST00000490447 CCDC88CQ9P219 2028 aa16.98■□□□□ 0.31
YIPF3-208ENST00000490447 LRRTM2O43300 516 aa16.97■□□□□ 0.31
YIPF3-208ENST00000490447 VPS26AO75436 327 aa16.97■□□□□ 0.31
YIPF3-208ENST00000490447 SNRNP200O75643 2136 aaKnown RBP16.97■□□□□ 0.31
YIPF3-208ENST00000490447 HPP00738 406 aa16.97■□□□□ 0.31
YIPF3-208ENST00000490447 ZGLP1P0C6A0 271 aa16.97■□□□□ 0.31
YIPF3-208ENST00000490447 FBLP22087 321 aaKnown RBP16.97■□□□□ 0.31
YIPF3-208ENST00000490447 CRADDP78560 199 aa16.97■□□□□ 0.31
YIPF3-208ENST00000490447 MFAP5Q13361 173 aa16.97■□□□□ 0.31
YIPF3-208ENST00000490447 CCSMST1Q4G0I0 132 aa16.97■□□□□ 0.31
YIPF3-208ENST00000490447 MRNIPQ6NTE8 343 aa16.97■□□□□ 0.31
YIPF3-208ENST00000490447 RNF44Q7L0R7 432 aa16.97■□□□□ 0.31
YIPF3-208ENST00000490447 SDCCAG8Q86SQ7 713 aaPredicted RBP16.97■□□□□ 0.31
YIPF3-208ENST00000490447 TMEM139Q8IV31 216 aa16.97■□□□□ 0.31
YIPF3-208ENST00000490447 DTWD1Q8N5C7 304 aa16.97■□□□□ 0.31
YIPF3-208ENST00000490447 ACAT2Q9BWD1 397 aa16.97■□□□□ 0.31
YIPF3-208ENST00000490447 YIPF2Q9BWQ6 316 aa16.97■□□□□ 0.31
YIPF3-208ENST00000490447 TSGA10Q9BZW7 698 aa16.97■□□□□ 0.31
YIPF3-208ENST00000490447 EIF2B3Q9NR50 452 aaKnown RBP16.97■□□□□ 0.31
YIPF3-208ENST00000490447 TREX1Q9NSU2 369 aa16.97■□□□□ 0.31
YIPF3-208ENST00000490447 OSGIN2Q9Y236 505 aa16.97■□□□□ 0.31
YIPF3-208ENST00000490447 KLK4Q9Y5K2 254 aa16.97■□□□□ 0.31
YIPF3-208ENST00000490447 NUP210LQ5VU65 1888 aa16.97■□□□□ 0.31
YIPF3-208ENST00000490447 NSG1A0A0A6YYJ2 146 aa16.96■□□□□ 0.31
YIPF3-208ENST00000490447 KRT87PA6NCN2 255 aa16.96■□□□□ 0.31
YIPF3-208ENST00000490447 PRPF4O43172 522 aaKnown RBP eCLIP16.96■□□□□ 0.31
YIPF3-208ENST00000490447 USP1O94782 785 aa16.96■□□□□ 0.31
YIPF3-208ENST00000490447 ZSCAN5DPP0CG00 497 aa16.96■□□□□ 0.31
YIPF3-208ENST00000490447 ARG2P78540 354 aa16.96■□□□□ 0.31
YIPF3-208ENST00000490447 RNF187Q5TA31 235 aaPredicted RBP16.96■□□□□ 0.31
YIPF3-208ENST00000490447 C4orf22Q6V702 233 aa16.96■□□□□ 0.31
YIPF3-208ENST00000490447 GSTA5Q7RTV2 222 aa16.96■□□□□ 0.31
YIPF3-208ENST00000490447 KBTBD2Q8IY47 623 aa16.96■□□□□ 0.31
YIPF3-208ENST00000490447 OR2A1Q8NGT9 310 aa16.96■□□□□ 0.31
YIPF3-208ENST00000490447 LMF1Q96S06 567 aa16.96■□□□□ 0.31
YIPF3-208ENST00000490447 CDC14AQ9UNH5 594 aa16.96■□□□□ 0.31
YIPF3-208ENST00000490447 ITPR2Q14571 2701 aa16.96■□□□□ 0.31
YIPF3-208ENST00000490447 LOC105369274A0A096LPK9 316 aa16.96■□□□□ 0.3
YIPF3-208ENST00000490447 LOC102723532A0A0G2JNH3 316 aa16.96■□□□□ 0.3
YIPF3-208ENST00000490447 DYTNA2CJ06 578 aa16.96■□□□□ 0.3
YIPF3-208ENST00000490447 H3BMM5 538 aa16.96■□□□□ 0.3
YIPF3-208ENST00000490447 E2F3O00716 465 aa16.96■□□□□ 0.3
YIPF3-208ENST00000490447 PHF2O75151 1096 aa16.96■□□□□ 0.3
YIPF3-208ENST00000490447 CXCR2P25025 360 aa16.96■□□□□ 0.3
YIPF3-208ENST00000490447 NMBRP28336 390 aa16.96■□□□□ 0.3
YIPF3-208ENST00000490447 RPA3P35244 121 aaPredicted RBP16.96■□□□□ 0.3
YIPF3-208ENST00000490447 RPL22P35268 128 aaKnown RBP16.96■□□□□ 0.3
YIPF3-208ENST00000490447 NPY2RP49146 381 aa16.96■□□□□ 0.3
YIPF3-208ENST00000490447 Q0VFX4 171 aa16.96■□□□□ 0.3
YIPF3-208ENST00000490447 TSTA3Q13630 321 aaPredicted RBP16.96■□□□□ 0.3
YIPF3-208ENST00000490447 CTSL3PQ5NE16 218 aa16.96■□□□□ 0.3
YIPF3-208ENST00000490447 OR4N4Q8N0Y3 316 aa16.96■□□□□ 0.3
YIPF3-208ENST00000490447 BCORP1Q8N888 145 aa16.96■□□□□ 0.3
YIPF3-208ENST00000490447 C8orf44Q96CB5 159 aa16.96■□□□□ 0.3
YIPF3-208ENST00000490447 MAGEB10Q96LZ2 347 aaPredicted RBP16.96■□□□□ 0.3
YIPF3-208ENST00000490447 DPH7Q9BTV6 452 aa16.96■□□□□ 0.3
YIPF3-208ENST00000490447 RBSNQ9H1K0 784 aa16.96■□□□□ 0.3
YIPF3-208ENST00000490447 MRPS30Q9NP92 439 aaKnown RBP16.96■□□□□ 0.3
YIPF3-208ENST00000490447 OLAHQ9NV23 265 aa16.96■□□□□ 0.3
YIPF3-208ENST00000490447 GUCA1BQ9UMX6 200 aa16.96■□□□□ 0.3
YIPF3-208ENST00000490447 DRG1Q9Y295 367 aaKnown RBP16.96■□□□□ 0.3
YIPF3-208ENST00000490447 A0A1W2PPV9 198 aa16.95■□□□□ 0.3
YIPF3-208ENST00000490447 OR2A25A4D2G3 310 aa16.95■□□□□ 0.3
YIPF3-208ENST00000490447 E5RI56 91 aa16.95■□□□□ 0.3
YIPF3-208ENST00000490447 NRP2O60462 931 aa16.95■□□□□ 0.3
YIPF3-208ENST00000490447 VAPBO95292 243 aa16.95■□□□□ 0.3
YIPF3-208ENST00000490447 MED26O95402 600 aa16.95■□□□□ 0.3
YIPF3-208ENST00000490447 CHRM3P20309 590 aa16.95■□□□□ 0.3
YIPF3-208ENST00000490447 FDXRP22570 491 aa16.95■□□□□ 0.3
YIPF3-208ENST00000490447 ATP5DP30049 168 aa16.95■□□□□ 0.3
YIPF3-208ENST00000490447 FMO4P31512 558 aa16.95■□□□□ 0.3
YIPF3-208ENST00000490447 FASTKQ14296 549 aaKnown RBP16.95■□□□□ 0.3
YIPF3-208ENST00000490447 RPS6KA1Q15418 735 aa16.95■□□□□ 0.3
YIPF3-208ENST00000490447 CCNG2Q16589 344 aa16.95■□□□□ 0.3
YIPF3-208ENST00000490447 ANKRD20A4Q4UJ75 823 aa16.95■□□□□ 0.3
YIPF3-208ENST00000490447 VWA2Q5GFL6 755 aa16.95■□□□□ 0.3
YIPF3-208ENST00000490447 NDUFAF7Q7L592 441 aa16.95■□□□□ 0.3
YIPF3-208ENST00000490447 OR1N1Q8NGS0 311 aa16.95■□□□□ 0.3
YIPF3-208ENST00000490447 RERGQ96A58 199 aaPredicted RBP16.95■□□□□ 0.3
YIPF3-208ENST00000490447 FAM136AQ96C01 138 aa16.95■□□□□ 0.3
YIPF3-208ENST00000490447 FAM114A2Q9NRY5 505 aa16.95■□□□□ 0.3
YIPF3-208ENST00000490447 UTP6Q9NYH9 597 aaKnown RBP16.95■□□□□ 0.3
YIPF3-208ENST00000490447 STOX2Q9P2F5 926 aaPredicted RBP16.95■□□□□ 0.3
YIPF3-208ENST00000490447 TRPC4Q9UBN4 977 aa16.95■□□□□ 0.3
YIPF3-208ENST00000490447 ANKRD12Q6UB98 2062 aa16.94■□□□□ 0.3
YIPF3-208ENST00000490447 ZNF839A8K0R7 811 aa16.94■□□□□ 0.3
YIPF3-208ENST00000490447 NIPSNAP2O75323 286 aa16.94■□□□□ 0.3
YIPF3-208ENST00000490447 KLHL18O94889 574 aa16.94■□□□□ 0.3
YIPF3-208ENST00000490447 MATN4O95460 622 aa16.94■□□□□ 0.3
YIPF3-208ENST00000490447 ESR1P03372 595 aa16.94■□□□□ 0.3
YIPF3-208ENST00000490447 ANXA5P08758 320 aa16.94■□□□□ 0.3
YIPF3-208ENST00000490447 MGAT1P26572 445 aa16.94■□□□□ 0.3
YIPF3-208ENST00000490447 EMP2P54851 167 aa16.94■□□□□ 0.3
YIPF3-208ENST00000490447 DSG2Q14126 1118 aa16.94■□□□□ 0.3
YIPF3-208ENST00000490447 ATG9BQ674R7 924 aa16.94■□□□□ 0.3
YIPF3-208ENST00000490447 RPUSD3Q6P087 351 aaKnown RBP16.94■□□□□ 0.3
YIPF3-208ENST00000490447 SUSD1Q6UWL2 747 aa16.94■□□□□ 0.3
YIPF3-208ENST00000490447 SLC34A3Q8N130 599 aa16.94■□□□□ 0.3
YIPF3-208ENST00000490447 CATSPER1Q8NEC5 780 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms